Labrus mixtus (cuckoo wrasse): 132992076
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Entry
132992076 CDS
T10666
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132992076 (ddx56)
Ribosome biogenesis [BR:
lmix03009
]
Eukaryotic type
Pre-60S particles
Helicases
132992076 (ddx56)
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NCBI-GeneID:
132992076
NCBI-ProteinID:
XP_060917185
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Position
17:602254..614537
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AA seq
560 aa
AA seq
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MAADRLQFHEMGIDDRLLKAVADLGWSEPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
ALPVIQRILASKQSVREQDVRALILVPTKELGHQVQTMIRQLTAFCSRDVRVADVSGTAD
LSAQRPILMEKPDVVVGTPSRVLAHLNAQNLLLHSSLEMLVVDEADLLFSFGFEADLKNL
LCHLPNIYQSFLMSATLTEDVQALKELLLHNPVILKLQGSQLPDSSQLQQYSIKCEEEDK
FLLIYTLLRLRLVQGKTLVFVGAVERSYRLKLFLEQFGIPACVLNSELPVHSRCHIITQF
NQGFYDYIIATDEQSLADPTAAPQTSSGKGKKKKKSAERDGKTKDKEFGVSRGVDFQNVA
NVVNFDFPATIESYIHRVGRTARADNPGTALSFISHTELALLSEVEEALSGDKSDSVLKP
YEFKMEEIEGFRYRCRDAMRSVTKQAVKEARLKEIKTELLNSEKLKTYFDDNPRDLQLLR
HDKDLHPAVIKPHLKNVPEYLIPETLRSSVNPLSARRRKKKMIEKSKPEGLVKSSFKKNI
SGKNPLRSFRYSGGRNRKVK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacaggcttcagtttcatgaaatgggcatagacgaccgtcttttaaaggcg
gtcgcagatctgggttggtccgagcccacattgatccaggagaaagccatccctttagct
ctggaggggaaagaccttctggcccgagctcggaccggatcaggaaagactgctgcttat
gccctccccgtcatacagcggatcctggcctccaagcagagtgttcgcgagcaggatgta
cgggcgctgattctggtgccgaccaaagagctcggccatcaggtgcagacgatgatcaga
cagctgacggcgttctgctcgagggacgtccgagtcgccgatgtctccgggacagccgac
ctatcagcacagaggccgatcttaatggagaagcccgacgtggtcgttgggacgccgtct
cgtgttctcgcccacctgaacgcccagaaccttctcctgcactcgtcgctggagatgctg
gtcgtagacgaggccgacctgctcttctcttttggcttcgaggccgatctgaagaacttg
ttatgtcacctgccgaatatctaccagtcgttcctgatgtcggcaactctcactgaggat
gttcaggccttaaaggagctgctgctacacaacccggtgatcctgaagctgcagggctcc
cagctgcccgacagcagccagctgcagcagtacagcatcaagtgtgaggaggaggacaag
ttcctgctgatctacacgctgctgcggctgcggctggttcaggggaagacgctggtgttt
gtgggcgccgtggagagaagctacagactcaaactgttcctggagcagtttgggattccc
gcctgtgtgctgaactcggagctccccgtccattccaggtgtcacatcatcactcagttc
aatcagggattttacgactacatcatcgccacggacgagcagagtttggccgaccccacg
gccgctccgcagacgtcgtcgggcaaagggaagaagaagaagaagagcgcagagagagac
ggaaagactaaggacaaggagttcggcgtctccagaggggtggatttccaaaatgttgcc
aacgtcgtcaactttgattttcctgcaaccatagagtcgtacatccatcgagtgggaagg
acggcgagggcggacaacccgggcaccgctctgtccttcatctcccacacggagctcgct
ctgctgtcggaggtggaggaggctctctcaggagacaaatcagattcagttctgaaaccg
tacgagtttaagatggaggagatcgaaggcttcaggtaccgctgcagggatgcgatgcgt
tcagtgaccaagcaggcggtgaaggaggctcggctgaaggagatcaagacggagctgctc
aactcagagaaactcaaaacgtatttcgacgacaacccgagagatctgcagctgctcaga
cacgacaaagacctccatcctgcagtcatcaaacctcacctgaagaacgtcccagagtac
ctcatcccagagactctgaggagctcggtgaatcctctgtcagctcgcaggaggaagaag
aagatgattgaaaagtccaaaccagaaggactcgtgaagagcagcttcaagaagaacatc
agtgggaagaacccgctgaggagtttccgatacagcggagggaggaacagaaaggtgaaa
taa
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