Labrus mixtus (cuckoo wrasse): 132992273
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Entry
132992273 CDS
T10666
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132992273 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132992273 (nup188)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132992273 (nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
132992273
NCBI-ProteinID:
XP_060917467
LinkDB
All DBs
Position
17:complement(8565682..8581187)
Genome browser
AA seq
1751 aa
AA seq
DB search
MTETKMAESELSVRSCRELWTILLGRSALREPAQIEAELDRHWNRLHQGLTYYKPPSSSS
AGKVKENKDVAQPLKDFGLRISKLLGLDEQQSVQLLQGYLQEDYRGTRDSLKVVLKDERQ
SQALLLKIADHYYDERLCLLRCVLLLLTYFQDERHPYRAEYSNCVNKLEKDLVSNYKSQF
EKLFKAEAPTWETHGNLMTERQVSLWFLQCLREQSLLLEIIFLYYAYFEMSPADLLSFTK
MFKEQGFGLRQTNRHLVNKSMDALVDRIGYLSSLILVEGMDIDFLHKCALEDSTDQHQFS
SAPDVIKEIDQLLLTFGDIPHHGPVLLAWVLLRHTLRPDESSPVVRRIGNTALQLGVFKY
ISTMLKGLGVSGNNCTASTAKMCVYGLLSFVITSFEEESLQTDGVATQCSQLIDAACEVL
SAPSLAEVFWEMKPNMGLGMILDSAVGMFPHKIGPLLQLLTALLSNKSTVKKVYNLLDKM
SFYTQVYKHKPSDIISKDDETLWKRQTPKLLYPLGSGQANLWMPQGVLGQVMIGGEQGYV
VRWDFSYSSWTLFTCEVEMLLHVVSTADVLAHCARVKPILDLVHKIISTDWTVSDCLLPL
TSRIYMLLQRLTSVINPPVDVIASCVNCLSVLAARMPGKVWSSLHHTGFLPFASNPLTSM
AQCVSAEGMKAGNYGNLLVQIEQPRGEYAVTIAFLRLITTLVKGQLGSTQNKGLIPCVLL
VLKEMLPTYHKWRYNTYGVRERIGCLILELIHAILNLSPEGEDQGSTPTLQTLCIYSLAN
TEAGQAVVNIMGVGVDTIDVVLAAQPSSCGSEGPGQILIQTVKLAFSVTNNVIRLKPPSD
VVSPLEQALTQHSGHGNNLIVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGS
DASAIRDAFLTRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEGKDGKEGSKEFL
LGEWSCLHVVLDLIDSKQQGKYWCPPLLHRAALAFLLALWQDRRESAISVLRKKERFWEN
LTTPLFGTLTPPSETTEPCVLETCAFVMKIIGLEIYYVVSGSLEQSLKDGLQKFSNARRY
EYWSQYVKSLVCHIAEMEEEGICYFPETQMLISAWRMLLILSTSHSDVMQLTEDSTKLKL
FMDVLEETKAALTTPMSVPCLRLGSMMATLLLILLKQWKSVVATAPDILSPLSLILESVL
QADQQMMERTKAKIFSALISVLQIQGLNGGDISQLPQLLLSVCETAKDEALALIDNTRLM
NQAGETVEDEDVMETDSPRGQQKDQRDGVCVLALHLAKELCRTDEDGEHWVSVMRKVPVL
PSVLSAVELSLRSKHNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQTICLPLLSVYEVS
SNGTSQSFSRKSQDSACWPGVYRLCMSLMESLLKTLRYNFINEALDFVGVHQERILQCLN
AVRTVQSLACLDEADHTVGFLLQLSSFCKEWQFHLPKLLRDIQVNLCYLCQTCTYLLHSK
KMLHHYLQAKNGEALPPGHLPRPQRPPQTPTKEAAGGGEREEAEQKALLAVQCSLLKILS
KTLATLQHFTPDCCQILLDQSMDLAEYHTLFVLSFTTPAFDPDVAPSFGTLLATINVALS
MLGEMEKKKEPVSLSIVSLASSEEIQALKSLLMFTMENCFYVLISQAARCLKDPSILPRD
KQRLKQELSSELSTLLSSLSRHFRRGSPSSPASGILPSTQSKPPTPGSKASHEGQEPFIQ
LVQAFVRLVQR
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacgaagatggcggaatcggagttgagtgtcaggagttgtcgggaattgtgg
accatacttctgggaaggtctgcactgcgggagccggctcagatagaagcagagcttgac
aggcactggaacagactacatcaaggacttacctactacaagccacccagctcatcctct
gctgggaaagtgaaggaaaacaaagatgttgcacagccactgaaggattttggtttgcgg
attagtaaattattgggtcttgatgagcagcagagtgtgcagcttttacagggctaccta
caggaagactacagaggaacccgtgattccttaaaggttgttctcaaggatgagcgacaa
agccaggcacttctcctgaagattgcggaccattactatgatgagcgcctgtgccttctc
agatgcgtcctgctcctgctgacatattttcaggatgaacgacatccctacagggctgag
tatagtaactgtgtaaataaactggagaaggatttggtgagcaactataagtcacagttt
gagaagctcttcaaagcagaagcaccaacatgggaaactcatggaaaccttatgacggag
aggcaggtgtccctttggtttcttcagtgtctgagggaacagtctctgctgttggagatc
atctttctgtattacgcatacttcgagatgagcccggctgacctgctgagcttcaccaaa
atgttcaaagagcaaggcttcggtttgcggcagacaaacagacacctagtaaacaagagc
atggacgcgctggtggaccgcattggatatttaagctctctcatcttggttgagggaatg
gacatagatttcctgcacaagtgtgctctggaggactctacagatcaacatcagttctct
agtgctcctgatgtcatcaaggagatagatcagctgctgctgacgtttggtgacatccct
catcacgggccggtgctgctagcctgggtcctgctgagacacactctgcggccggacgag
tccagccccgtggtcaggaggataggcaacaccgccctgcagctcggggtgttcaagtac
atttcaaccatgctgaaaggccttggagtctcaggaaacaattgcacagcaagcacagcg
aagatgtgcgtctacggcctcctctcgtttgtgatcacttcttttgaagaggaaagctta
cagacagacggcgtggcgactcagtgctcgcagctgatcgatgctgcctgtgaggtgctg
tctgctcccagtctggctgaggtcttttgggaaatgaaaccaaatatgggattaggaatg
atccttgacagtgctgtggggatgttccctcataagatcggaccactgttacagctgctt
actgctcttttgtcaaacaagtcaacagttaaaaaggtttacaaccttttggataagatg
tcattctacacacaagtttacaaacacaagcccagtgatatcatctcgaaggacgatgag
acactgtggaagaggcaaacaccaaaactcctgtaccctctcggctcggggcaggccaac
ctgtggatgcctcagggagtgctgggtcaggtgatgattggaggcgagcagggctatgtg
gtccgctgggatttctcctacagctcctggacgctcttcacctgtgaggtggagatgctg
ctccacgttgtttcaactgcagatgttttagcacactgtgctcgtgtgaagcccatcctg
gatctggtccataagatcataagcacagactggactgtctctgattgtctgctgcctctc
acttcacgcatctacatgttgctgcagaggttgacgtcagtcatcaaccctcctgtggac
gtgatcgcctcctgtgtcaactgtctctctgtcctggctgcgaggatgcctggaaaggtg
tggtccagtctgcaccacacaggtttcttaccctttgcctccaaccctctgaccagcatg
gctcaatgtgtgagtgctgaagggatgaaggcaggtaactacggtaacctgctggtgcaa
attgagcagcctcgaggggagtacgctgtgaccattgccttccttcgtctcattacaacc
ctggtcaagggtcagcttggcagcactcagaacaaaggcctgatcccctgtgtgctgctg
gtgttaaaggagatgcttcccacgtaccacaagtggcgttacaacacctatggagtcagg
gagaggataggttgtcttattttggagctgatccatgctatcctcaatctgagcccagag
ggagaggatcagggcagcactcccaccctgcagactctgtgcatctacagcctggcaaac
actgaggctggacaggcggtcgtcaatattatgggagttggagttgacaccatagatgta
gtcctggctgcacagcccagcagctgtggctctgagggtcccggtcagatcctgatccag
acagtcaaactggccttctccgtcaccaacaacgtcatccgcctgaagccgccgtctgac
gtcgtgtcccctctggagcaggcactgacgcagcatagtggccatggcaacaatctcata
gttgtcttggccaaatatatttaccacaaacacgacccagcgctgcctcgcctggcaatc
cagctgctgaaacgtctcgccacggtggctcctatgtcagtgtacgcctgccttggcagc
gacgcatcagccatcagggatgcgttcctcactcggctgcagagcaaaacagaagacatg
aggatcaaggtcatgatcctggagttcctaactgttgctgttgaaacgcagcctggcctc
attgagcttttcctcaacctggaaggcaaagatggaaaggaagggtccaaggagtttctg
ttgggtgagtggagctgtcttcatgtggtgttggacctgatcgactccaaacagcagggg
aagtactggtgtccccccctgctgcacagagcggccctggccttcctgcttgctctctgg
caggatcgcagagaaagcgccatctctgtcctgcgtaaaaaggagagattttgggagaat
ttgacaacccctctctttggaaccctcactccaccttcagagaccacagagccttgtgtt
ctggagacgtgtgcttttgtcatgaaaatcatcggcctggagatctactacgttgtcagc
ggttccttggagcagtctctaaaggacggccttcagaagttttccaatgcacgacgatat
gagtactggtcccagtatgtgaagtctctggtgtgccatatagcagagatggaggaggag
ggaatctgttactttcctgagacccagatgttgatctctgcctggaggatgctgctcata
ctctccacaagccattccgatgtgatgcagctaacggaggactcaaccaaactgaagctt
ttcatggatgttctggaggagaccaaagctgctctcactacacccatgtctgtgccttgt
cttcgtcttggatccatgatggccactctactactcatcctgctgaaacaatggaagagt
gtggtagctacagcccctgacatcctgtctccgctctccctcatcctggaaagcgtcctg
caggctgaccagcagatgatggagaggaccaaagccaaaatcttctctgctctcatctct
gtgctgcagattcagggactcaacggcggagatatttcccaactgccccagcttttgttg
tccgtgtgtgagacggcgaaagatgaagccttggcgctcatcgataatactcgcctcatg
aaccaggcaggagaaacagtggaggacgaggacgtcatggaaacggactctccccgcggc
caacagaaggaccagagagacggggtgtgtgtgctggctctgcacttggcgaaggagctg
tgtcgcaccgatgaggacggggagcattgggtctcagtgatgaggaaggtgccggtcctc
ccctcagtgctcagcgctgtggagctcagcctacgatccaaacacaacctctacttcact
gaggccgcacttcacctgctgctcacactggcccgcacgccacagggggcagcagcggtt
gcaggagcaggagtcatccagactatttgcctccctcttctgagtgtctatgaggtttct
tcaaacggaacatcacagagtttctctcgcaagtcccaggactcggcctgctggcccgga
gtgtaccgcctctgcatgtctttaatggagagtctgctgaagactctgcgctacaacttc
attaacgaagctctggactttgtgggagtccatcaagaacgaatacttcagtgcctgaac
gcagtgcggacagttcagagtctggcctgtttggatgaggcggatcacacggttggcttc
ctgctgcagctctccagcttctgtaaagagtggcagtttcacctccccaagctgctgcga
gatatacaggtgaacttgtgctatctgtgccagacctgcacgtatctgctccacagcaag
aagatgctccatcactacctccaggcgaaaaatggggaagcgctgccccccggtcacctc
cccaggccacagcgacccccccaaactccgacgaaagaggccgcaggcggaggagagagg
gaggaagctgagcaaaaagccctgctggctgtgcagtgcagcctcctgaagatcctcagc
aaaactctagcaactctgcagcacttcactccagactgctgccagatcctcctggaccag
agtatggatctggcagagtatcataccctgttcgtgctcagcttcacgacaccggcgttt
gaccctgacgtggctccatcgttcgggaccctgctggccaccatcaatgtggctctgagc
atgttgggcgagatggagaagaagaaagagcctgtttcactgagcatcgtctctctggcc
tcatcggaggagatccaagctctcaagtccctgctgatgttcaccatggagaactgtttc
tacgtgctcatctctcaggcggctcggtgtctcaaagacccctccatcctccctcgagac
aaacagaggctcaaacaggagctcagctctgaactgagcaccctcctctccagcttgtcc
cgacacttccgccggggctctccatcatccccggccagtggcatcctcccctccacccag
tccaaaccccccacaccgggctccaaggcaagccatgaaggtcaggagccgttcatccag
ctggttcaggcatttgtcagactggtgcaaagatag
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integrated database retrieval system
