Labrus mixtus (cuckoo wrasse): 132992358
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Entry
132992358 CDS
T10666
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132992358 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132992358 (fip1l1b)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132992358 (fip1l1b)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
132992358
NCBI-ProteinID:
XP_060917592
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Position
2:31512248..31522706
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AA seq
563 aa
AA seq
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MSAEEADKTGTADASAGDEEEEWLYGDESESKDEDEEVKPNAASDAPADASTEDATEHAT
GNGVASEATGEAAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKTAG
SRPYGQAKLKGVDLDAPGNINGVPVLEADMESFEEKPWRKPGADLSDYFNYGFNEDTWKA
YCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDMSILPVHTSKPDFTSPVNMYKSSV
SQVTRISPPQWPGPPIQDMSYYTKTSGTIDVIGGQTATISRVEGRRRHNLEGNNIQVISE
QSDSEPTPAKIPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPIFTVPCLSSRAGLP
ITVPPPGFPPPPSGPPPAMIPTMDSGHPGGYDGRSVPPYPFPQGGYPPPMTGGPPPWPPM
MDNSKPWENYYRRDDNKREKERERPRERTHEREREREHSPSAMGYTSEEERYRYREYQER
AYGERHRDRASREKEDRHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSK
RSKEGKEASEEISADQENQEAME
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaagaagcggacaaaacaggcaccgcggatgctagcgccggtgatgaggag
gaggaatggctgtatggagatgagtctgagagcaaagatgaagacgaggaggtcaaacca
aatgctgcaagcgatgcacccgctgatgcgtcaacagaagatgccactgagcacgctaca
ggaaacggcgttgcctccgaggccacaggggaagcagcaggtgaggatgtggacagtgac
agcgacagtgatgatgacgacgatgacgtccgtgtcaccatcggagacataaaaactggc
gcgccacaatacacaacgtacggagcgccacccgtcaatctcaacataaagacggcaggc
tcaagaccgtatggacaagccaagctgaagggagtggatctggacgcccctggaaacatt
aacggcgttccagtgctggaggccgacatggagtcgtttgaggagaaaccctggaggaag
ccaggagcggatctgtctgattactttaactacggcttcaatgaggacacgtggaaggct
tactgtgagaaacagaagaggctgcgcatgggcctggaggtctccactgtcggctcagtg
acgagcaagatcacagttcagcagggcaggacaggcaatgagaaggacatgtccatttta
cctgttcacacctccaagccagacttcacgtctcctgtcaacatgtataagtcttctgtc
agtcaggtcaccaggatctccccccctcagtggcctggcccgcctatccaggacatgtcc
tattatacgaagacgagcggtacgatcgacgtgatcggaggacagacggccaccatcagc
cgggttgaagggcgccgcagacacaacctagagggcaacaacatccaggtgatctccgaa
caatcagactctgagccgactccagctaagatacccaccttcttcccgcctggacccctc
cctccaaacatacccccgccccctttcctcccaccgccacccaacgtcagcactgcaccg
cccctcatccccccgcccatatttactgttccatgtctttcctctcgtgcagggttgccc
attactgttccacctcctggttttcctcctccacctagtgggccccctcccgctatgatc
cccactatggacagtggccaccctggaggttatgacggacgctcagtccctccctacccg
ttccctcaaggtggataccctccgcccatgactggaggtcctcctccctggccgcccatg
atggacaactcaaaaccctgggaaaactactaccgacgagacgacaacaagagagaaaag
gagagagagaggccacgagagaggacacacgagcgggagagagagagggagcacagcccg
tcagccatgggctacaccagcgaagaggagcggtatcgttaccgcgagtaccaggagcga
gcttacggagagagacatcgggaccgggccagccgggagaaagaggacagacacagagag
aggcggcaccgagagaaagaagaggggcgccacaagtcctcccgcagcagcagtagcagg
aggaggcatgacagcgaggagggcgacagccacaggagacacaaacacaagaagagcaaa
aggagcaaggagggcaaagaggccagcgaggaaatcagcgcagaccaagagaaccaggag
gccatggagtag
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