Labrus mixtus (cuckoo wrasse): 132992642
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Entry
132992642 CDS
T10666
Symbol
rc3h2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132992642 (rc3h2)
04121 Ubiquitin system [BR:
lmix04121
]
132992642 (rc3h2)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
132992642 (rc3h2)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132992642 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
zf-CCCH_4
zf_CCCH_4
Prok-RING_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
132992642
NCBI-ProteinID:
XP_060918061
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All DBs
Position
17:13388313..13410719
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AA seq
1148 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPDVQPVSLSSPAEVENYEACRVCVEELALYLKPISGAKGVAT
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLASLRPHLELLANI
DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSTSVSRAFPLAPGVMGKTFTMEGSLHTDVSA
GVGQGLKGTGENTAALTEGLPSLTHPQLVSRGADVIEDLKRVVPNGSSGANGTNGIPGTN
RNTPGSNEQKPISPSRTPVSHSSASSPLATVGRGDGVAPMPKHGPFLLRAPHPSQASELY
YHDPHSAYETSHYPPTSCSYYPSTLHPPHKTCMARFLRSSNVPESSLPPSIGPPPSSYPG
DPQTQHPPVSSSSGYPPHPPRDRMVPPAFHHHPGQPPYGPLAPAHGVYAPLYDSRRVWRP
QLYHREDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGAEHRLHRDYGRVPLGYEDL
FRRKQEQWAHHHHHHHHNANKPSQSSPIFTIDFGTEHVESSGGQCVGCRFRGEESLAHYS
PWSCGTIGPCLSPFEPETLTNTTTHSCSGHSDLDSNAGGDVGVTSVGKRWLHSLDHYRRL
KDEDPIIPFSEGPIISKWGAISRAARTGYHTTDPVQATACQGSVSTTPINFKDYNPHLDH
SDYRWSSRGSDSSSHSSFLESELHCRRTSISSGEKIVSDLQTHQTVYSQDQDRAESESDP
GRDIELELCALDMEDSDPQEIKSQDSLDLATQQSQDASNLLPPSCSSPLLSSPMEEQPQS
EGPSTEKMDSHLLKKMAFRKSLSPGGLVSGGLGVGKLLMRTGPPRLGDTTATRVCPETSV
TGMLLNGS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcggcccagtggacagagtttctgtcctgtcccatctgctacaatgag
tttgacagcagtggccaccagcccatcagcctgggatgctcccacacagtgtgtaagacc
tgcctacacaaactgcaccgcaaggcctgtccctttgaccagacgccaatcagcacagat
atcgacctgctgccggtcaactgcgctctgttgcagcttgtcggagctcaggtcccagat
gtgcagccggtgagcctgagcagtccagccgaagttgagaactatgaggcgtgcagggtg
tgtgtggaagagctggctctctacctgaaaccgatcagtggagcaaaaggtgtggcgaca
ctgagcccaagcgtgctcagtcggccgatgcaaaggaagctggtgacgctggtgaactgc
cagctggtggaggaggagggccgtgtgcgtgcagtgcgggcaggccggtctctgggcgaa
agaacagtaactgagctcatcctgcagcaccaaaacccccagcaactatctgccaatctc
tgggcagcggtcagggcgcggggctgccagtttctgggacctgctatgcaagaagatgca
ctgaagctagttcttctggccctggaagacggctcggctttgtccaggaaggtgttggtt
ttgttcgtagtccagaagctcgaggctcgcttcccacaagcctctaaaaccagcataggc
cacgtggtgcagctgctctacagggcctcctgcttcaaggtgactaaacgcgacgaggac
tcctcgctgatgcagctgaaggaggagtttcggacgtacgaggctctgaggagggaacac
gacgctcagatcgtccacatcgccatggaggcaggcttacgtatttcacctgagcagtgg
tcgtctctgctgtatggagacctggtccacaaatcacatatgcagtcaatcattgacaag
ttgcagtctccagagtcttttgctaaaagcgttcaggagctgacaatcgttctgcagagg
actggagaccctgccaacctcgccagccttagaccgcacctggagctacttgctaacata
gaccacaacccagatgcaccggcaccttcctgggaggagctggagagtgtgatgctagcc
gtgaagttggtggttcacggacttgtggaatttatacaaaacttcagcaagaagagtcat
gatactccacagcctcaggccaacagcaagtacaagaccagcatgtgccgagaccttcgt
cagcagggaggctgtcccagaggaactaactgtacatttgctcacacacaggatgagctg
gagaaatttagactaagaaacaagaagagcaccagtgtcagccgtgcgttccctctagca
ccaggggttatgggtaaaaccttcaccatggagggcagcctgcacactgatgtgtctgca
ggagtggggcaggggctcaaaggcacaggggagaacacagctgccctgacagagggattg
cccagcctgactcaccctcagctggtctccagaggggctgacgtgattgaggacttgaag
agagtggtgccaaacggatccagtggggctaacgggaccaatgggattccaggcaccaac
agaaacacacctggctcaaatgaacaaaagccaatctctccttccagaactccagtcagc
cactcttcagcctcgtctcccctggcaaccgttggacggggcgatggtgttgctcctatg
cctaaacatggtcctttccttctgcgtgcaccacatccttctcaggcgtcagagctgtac
tatcatgatccccactctgcatatgaaaccagccattatccaccaacatcatgttcctac
tacccatctactcttcatcctccccacaaaacttgcatggctcgcttccttcgatcctcc
aacgtcccagaatcctccctgcccccctcgattggccctccaccgtcttcctaccccggc
gatcctcagacgcagcacccacctgtctcctcctcttcaggatacccaccacacccacct
agagatcgtatggtacctccagccttccatcaccacccagggcagcctccttatgggcct
ctggctcctgctcacggtgtttatgctcccctatatgacagcaggagagtttggagaccc
cagctgtaccacagagaagatgccaggagtaactctctgcccccagaagtgctgcactcc
tccgtataccagcctccactcagggagagattcaactctttagacagcaactactgctct
ggagctgaacaccggctacacagggattacggccgtgttcctctgggctatgaggatctg
tttaggaggaagcaggaacagtgggctcatcatcaccaccaccaccatcacaacgccaac
aaaccctcccagtcctcccccatcttcaccattgattttggaacagagcatgtggaaagc
agtggcggtcaatgcgttgggtgccggttcagaggcgaggaaagtttagcgcactactct
ccgtggtcctgtggtaccatcggcccctgcctcagcccctttgagcctgaaacactcaca
aacacgacgactcactcctgctcagggcactcggacttggacagtaatgcaggtggggat
gttggtgttaccagtgtggggaagcgatggctgcattctttggatcactaccggcgcttg
aaagatgaggaccccatcattccttttagtgagggaccgatcatctcaaagtggggagcc
atatcaagggcagctcggacaggctaccacaccaccgaccctgtccaagctacagcctgc
cagggtagtgtcagcactacacccatcaactttaaagattacaacccgcatttggatcac
agcgactacaggtggagctccagaggctcagactcttccagccactctagttttttagag
agtgagcttcactgccgtcgcacatcaataagcagtggcgagaaaattgtgtcagatctg
caaactcatcaaacagtctacagccaggatcaagaccgagctgagagcgaatctgacccg
ggtcgagacattgaactggaactgtgtgcacttgacatggaagattcagacccgcaggag
atcaagtctcaggattctttagacctggccactcaacagtctcaggatgcttccaacctc
ctcccaccttcctgctcctctcccctcctctcctctcccatggaggagcagccccaatca
gagggtccttcgacagaaaagatggactctcacctgctgaaaaagatggccttcaggaag
tctctgtctcctggagggttggtctccggaggcctgggagtcggcaagctcctgatgcgt
actggacctcctcgattgggggacaccactgccacaagggtctgccctgaaacatctgtg
acagggatgctgctcaatggaagctaa
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