Labrus mixtus (cuckoo wrasse): 132992665
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Entry
132992665 CDS
T10666
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132992665 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmix04990
]
132992665 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
lmix04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
132992665 (pdlim5b)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
132992665
NCBI-ProteinID:
XP_060918112
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Position
17:11137491..11176048
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AA seq
613 aa
AA seq
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MSSSYSVTLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAARAKMSIGDVILSIDGISTD
SMNHLEAQNKIKACTDHLSLTLQRPSSAPKNGVPRDEPQEIIKPVPITHLAPSTTYTRPS
SSPSPAYNKTARPFGAGSRAVTASPIPDAPKVATIPSASSAFTPAAPSQPQPPFPLKSSP
APPDSTPASLVPKPSSGRSPFTSPYSSSSSSNSSSPARVTAPPSHPNVPQPSVYNTPINL
YSSNNACEVAIGQRRGLLESQGLSENFNGKPFEDPENHTSPLSDSSKKRLIEDTEDWHPR
TGTSQSRSFRILAQLTGTENEQVPENSGKNEAVDITAPAVHTSPAAKTFSKSAAAPKNGS
FIPASSYKSPAAQNKPSYQPGGPTGFPKGGAVPSFGKVTNLTPKGPDRPTPQPHPQDLNS
LVQRAEHIPAGTRTPMCNKCNSVIRGPFLVAMGMSWHPEEFNCDHCHSSLVEHGFVEEKG
QVYCANCYEQFFAPTCGCCNQKILGEVMNALKQTWHVSCFVCAACYQPIKGNMFHMEDGQ
PYCEQDYYRLFGTNCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCSTSLEGQAFFSKKD
KALCKKHAHTVNI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagcgtcacactggctggccccgccccctggggcttcaggctgcag
ggagggaaggacttctgtctgcccctcaccatctcacggctcactgatggaggaaaggca
gccagagcaaagatgagtattggagacgtcattctgtccatcgatggcatctccacagac
agcatgaatcacctggaggcccagaacaagataaaggcctgcacagaccatctcagcctc
actctgcagagaccctccagtgcccctaaaaatggagtccctcgggacgaacctcaagaa
atcataaagcctgtcccgatcactcacctcgcaccgagcaccacatacaccaggccatcc
agttcgcccagtcctgcttacaacaagactgccaggccttttggtgctggcagtagggca
gtcactgcttctcccatcccagacgctcccaaagtagccaccatcccctctgcatcatcc
gcttttacaccagctgccccttctcaaccacagcctccattcccgctgaagtcgagcccg
gcacccccggactcaactccagccagcttagtcccaaagcccagctctggccgctcccca
ttcacctcaccatactcctcttcctcctcatctaactcctcctctccagccagagtgaca
gcccccccttcccatcctaatgtcccacagccctccgtctataacaccccaatcaacctg
tactccagcaacaatgcttgtgaggtggctattgggcagagacggggtcttttggagagc
caggggctgtcggaaaacttcaatgggaaaccatttgaggaccctgagaatcacacgtcc
ccactcagtgattccagcaagaagcgtctgattgaggacacggaggactggcacccgaga
accggcacctcccagtcccgctccttccgtattctggcccagctcaccggcactgaaaat
gaacaagttccagaaaacagtgggaagaatgaggcagttgacatcactgctccagctgtg
cacacctcgcctgcagcaaaaacattttccaaatctgccgcagcacccaaaaacggcagc
ttcatccctgcatcctcgtacaaaagcccggcggcccagaacaagccttcctaccagccc
gggggtccaacaggttttcctaagggtggagcagttccttcattcggcaaagttactaac
ctgactcctaaaggtccagaccgtcccaccccacagccacacccacaggacctcaactct
ctggtgcagcgggcggagcacatcccagctggcacccgcaccccgatgtgcaacaagtgc
aacagtgtcatcagggggcctttcctcgtggccatgggcatgtcgtggcaccctgaggag
ttcaactgtgatcactgccattcctccctggtagaacacggctttgtggaggagaaaggc
caggtgtactgtgcaaactgctacgagcagttcttcgctcccacctgtggctgctgcaac
cagaagattctgggggaggttatgaatgctctgaaacagacctggcacgtgtcctgtttt
gtctgtgccgcctgctaccagccaatcaaaggcaacatgttccacatggaggacggacag
ccgtactgtgaacaagactactacaggctgttcgggaccaactgccacggctgtgacttc
cccatcgaggcgggggataagttcctggaggctttaggattcacctggcatgacacctgc
ttcgtgtgcgcggtctgctccactagtctcgaaggtcaggcattcttctccaagaaagac
aaggctctgtgcaagaaacatgctcacactgtcaacatctga
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