Labrus mixtus (cuckoo wrasse): 132992827
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Entry
132992827 CDS
T10666
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04140
Autophagy - animal
lmix04148
Efferocytosis
lmix05132
Salmonella infection
Brite
Membrane trafficking [BR:
lmix04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
132992827 (vps39)
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NCBI-GeneID:
132992827
NCBI-ProteinID:
XP_060918323
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Position
18:25246451..25273807
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AA seq
876 aa
AA seq
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MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAGTNRFEVTLEKSNK
NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVLSKAKGATLFACDLQLTSAGE
ERLRMCVAVKKKLQLYYWKDREFHELQGDFSAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGTIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCAINWTDIPISME
HQPPYIIAVLPRYVEIRTVEPRLLVQSVELQRPRFITSAGPNIVYVASNHFVWRLVPVSI
ASQIRQLLQDKQFELALQLAKMKDDSDGDKKQQIHHIQNLYAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPTLSGPELEKAHLALIDYLTQKRSHLVKQL
NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENMG
IIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDKVLNFLKEGFKELAIPYLEHIVYVWD
DEGPEFHNVLIQLYLERVQGLMKQYLNSLPEGVPAVAAGKEDGDLGEFRNKLLSFLDIST
SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHRHYSSSVD
GKKDVYLSLLRMYLSPPDVHCLGPIKMELSEPQANLQAALHVLELHHSKLNTTKAINLLP
ANTQIREIRVFLESVLEEKAQRKRCNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRNVCPTEQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcgtatgaaccagtaccgatcctggagaagcttcctctgcagatcgactgt
ctggcggcctgggaggactggctgcttgtgggaacaaagccggggcatctcctcctctac
agaataaagaaggatgcaggcaccaaccggtttgaggtgaccctggaaaaatccaacaag
aacttctccaagaagattcagcagctttacgtcgtctctcagtacaagattcttgtcagt
cttcttgagaacaacatccacgtccatgacctcctgaccttccagcagatcactgtcctg
tccaaagctaaaggagccacgctcttcgcctgtgacctgcagctaaccagcgccggagag
gaaaggttgagaatgtgtgtggcggtgaagaagaagctgcagctgtattactggaaggac
agagagttccacgagctgcagggagacttcagtgctccagatattcctaaatccatggcc
tggtgtgaaaactccatctgtgttggtttcaaacgagactattacctcatccggatggac
ggtcgaggcaccatcaaggagctgttccccactgggaaacagctggagcctctggtcgcc
ccactggctgatgggaaggtggcggttggtcaggacgacctcactgtggtgctgaatgaa
gaaggcgtgtgcactcagaagtgtgccatcaactggaccgacatccccatctcaatggag
caccagccgccgtacatcatagctgttcttcctcggtatgtggagatccgcaccgtcgag
ccccggctgctggtgcagagcgtggagctgcagaggccgcgcttcatcacctcggcaggg
ccaaacatcgtctacgtcgccagcaaccattttgtgtggcgcctggtgcccgtgtccata
gccagccagatccggcagcttcttcaggacaagcagtttgagctggctctccagctggcg
aagatgaaagatgattccgacggtgataagaagcagcagattcatcacatccagaatctc
tacgccttcaacctgttctgccagaagaggtttgatgactccatgcaggtgttcgctaaa
ctcggcacagatcccactcacgtcatcggcctgtatcctgacttgctcccgtcagactat
cgcaaacagcttcactatcccaaccctctgcccacgctgtccgggccggagctggagaag
gctcacctggctctcatcgattacctcacccagaaacgcagccaccttgtgaaacagctg
aacgactctgacccttcgacgacgtctccgctcatggagggaacgccgaccataaaaagc
cgcaaaaaactgctgcagatcatcgacaccaccctgctgaaatgttacctacacaccaac
gtggccctggtgtcccccctcctccgcctggagaacaaccactgtcacatcgaggagagc
gagtacgtcctgaagaaggcgcacaagtacagcgagctcattatcctctatgagaagaag
ggcctgcatcagaaagctctgcaggttctgctggatcagtccaccaaggccaactctcct
ctgaagggccacgagcgaacggtgcagtacctccagagactcggagtggagaatatggga
ataatctttgagttttctccctgggtgttgaagatctgtcctgaggatggattgaagatc
ttcacagaggacctgacagaggtggagactttgcccagagacaaggtgctgaacttcctg
aaggagggcttcaaggagctcgccatcccgtatctggagcacatcgtctacgtgtgggac
gacgaaggccccgagttccacaacgtgctgatccagctctacctggagagggtgcaggga
ctcatgaaacagtacctcaactctctgcccgaaggagttccagctgttgccgcggggaag
gaggacggtgatctgggcgagttcaggaacaagctgctgtcgtttctggatatttccacc
agttatgaacccgccagactcatcagtgactttcccttcgatggccttctggaggagcgc
gctctgcttctgggtcggatgggtaaacacgagcaggcactcttcatctatgtgcacatc
ctgaaagacacccgcatggctgaagaatactgtcaccgacactacagcagctcagtggac
gggaagaaagatgtgtatctgtctctgctgcggatgtacctgtcgcctcctgacgtccac
tgcctggggccgatcaagatggagctgtccgagcctcaggccaacctgcaggcggcgctg
cacgtcctggagctgcaccacagcaaactcaacaccaccaaggccatcaacctgctcccg
gccaacactcagatccgagagatccgggtgttcctggagagcgtgctggaggagaaggct
cagaggaaacgctgcaaccaggtgctgaagagtctgctgcaggccgagttcctccgggtg
caggaggagcggatcttccaccagcaggttaaatgtgtcatcacagaagaaaaaacctgc
agagtctgcaagaagaaaataggaaacagtgcgtttgccagatatcctaacggcgtggtg
gttcattacttctgctgcaaagatcgcaacgtttgtcccaccgagcagtaa
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