Labrus mixtus (cuckoo wrasse): 132992912
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Entry
132992912 CDS
T10666
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmix03041
]
132992912
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132992912
Spliceosome [BR:
lmix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132992912
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132992912
NCBI-ProteinID:
XP_060918474
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All DBs
Position
2:complement(32870944..32876823)
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AA seq
427 aa
AA seq
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MTETDVDTELLDYEEDEEPQVAPESGTSTNKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGMTIKKDEEVLKKNCPHIVVGTPGRTLALIR
NKSLNVKNIKHFVLDECDKVLEQLDMRGDVQEIFKVTPHDKQVMMFSATLSKDIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQAR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgactgagacagacgttgatactgaactgctcgactatgaggaagacgaagagcctcag
gtagcccccgagagcgggacctcaacaaacaagaaggaggtgaaggggtcctacgtatcc
atccacagctcgggcttcagagacttcctcctcaaacctgagctgcttcgtgccatcgta
gactgtggttttgagcatccctcagaagtccaacacgagtgtattccccaagctatcctg
ggcatggacatcctgtgtcaggccaagtctggtatgggaaagacggcagtgtttgtgctg
gccaccctgcagcagatagaacctgtggatggccaggtgtccgtgcttgtcatgtgccac
acgcgagagttggccttccagatcagcaaagagtacgagcgcttctccaagtacatgccc
acggtcaaggtgtccgtgttcttcggcggcatgaccatcaaaaaggacgaggaagtcctg
aagaagaactgtcctcacatcgtcgtggggacccccgggcgcaccctggccctcatccgc
aacaagagcctcaacgtgaagaacatcaaacactttgtgctcgacgagtgcgataaggtg
ttggagcagctggacatgaggggtgacgtccaggaaatattcaaggtgacgccccacgac
aagcaggtgatgatgttcagcgccacgctaagcaaggacatccgacccgtctgccgcaaa
ttcatgcaggatccaatggaagtgttcgtggacgacgagaccaagctgaccctccacggc
ctgcagcagtattactgcaagttgaaggacaacgagaagaaccgaaagctctttgacctg
ctcgacgttctggagttcaaccaggtggtgatctttgtgaagtctgtgcagcgctgcgtg
gctctgtcccagctgctggtggagcagaacttccccgccatcgccatccacaggggaatg
gcacaggaggagcggttatcgcgctatcagcagtttaaagactttcagcggcggatcctg
gttgctacaaacctgtttggccgaggcatggacatcgagcgagtcaacattgtgttcaac
tacgacatgcctgaggattcagacacgtaccttcacagggttgcccgtgccggcaggttc
gggaccaaaggcttggccgttacttttgtgtccgacgagaccgacgccaagaccctgaac
gatgtccaagaccgctttgaggtgaacgtagcagagctccccgatgagatcgatatctcc
tcctacattgaacaggccagatga
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