Labrus mixtus (cuckoo wrasse): 132992948
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Entry
132992948 CDS
T10666
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132992948 (dicer1)
microRNA pathway
RISC loading complex
132992948 (dicer1)
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GFIT
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NCBI-GeneID:
132992948
NCBI-ProteinID:
XP_060918532
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Position
18:6382479..6408348
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AA seq
1911 aa
AA seq
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MAGLQLVTPATSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLTKELSHQIRGRYQENAKRTVFLVNSALSVVQQAAAVRTHSDLQVGEYTDLEET
SSWTDQQWSQEIIENQVLVMTCHMFLHVLRNKILQLSKINLVVFDDCHLAITDHPYCDIM
KLFEGCSGSSRILGLTASILNGKCDPSELEHKIQNLETILKSNAETATDLVVLDRYASQP
REVVLDCGPYMDKSGLSSRLQEELDDALHFLNDCNVPVAREDRDPTFISKQVLSDCRAVL
MVLGPWCADKAAGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHFSPASLDL
KFVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEVEVKERP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADSERTKSFEDDLTTYKAIEKILRNKCSKSVEVSEFEVEQVLDDDNI
LPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTAETQNGRFQSTLYLP
INSPLRVPIKGPIMNCARLAEKAVALLCCEKLHKTGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPECLRDSYAVPEQTYYLYVIGMVLTTPLPDELNFRRR
KLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFSLTTAQLDLITRLH
QYIFSHILRLEKPALEFKPTLADSAYCVLPLNVVGDTDTLDMDFTFMEDIEKSEARTGIP
TTQYTKQNPFTFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAE
YYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASEAGVGAQTLPPDFR
YPNLDFGWKRSINSKTFITCSDSCDEDAEDGEDGEEDHCTHQETETADPDPLTHPSSLHS
SPSKSRDPPCTRNLTNGTAQVANCDDDGHQHEHLHQHDNCQCSQPDPPGLQSPESIQTTT
SVSVQPSPSVKKPSSSPPQPSDECTAGRTSDHKNQATSVSSREATGPHTHTAPSPDLPTV
PQHRAEAGDSPKSLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYP
DAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSIPDK
PDSEEAKEELLANGRSGNDFDEEDEEEELEEEEEVVEDDAELMLKDEPKDEVNMEDDLEY
YKEHIKFIDNMLLGSGAFGKKISLSGFPPPLTPASAASPPMESPYEWKPPKKAHHPTAAH
FPSEPAPSAPSAEEFDYSSWDAMCYLDPSKAGEEDDFVVGFWNPSEENCGAELGKQSISY
DLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLERGNLTGAVVQSR
HTAIDLCYGWLKIPPRSLLDHPDAERTLNHLISGFENFESKINYTFQNKAYLLQAFTHAS
YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK
YDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDI
FESLAGAIYMDSRMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAE
RTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVQNN
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctacagcttgtcacccctgccacttcacccatggggcctttctttggtctg
ccgtggcagcaggaggcgatccacgataacatctatacacctaggaaatatcaggtagaa
cttcttgaagcagctcttgaacataatactatcgtctgcttgaatactggctcagggaag
acctttattgcagtacttctaacgaaagagctctcccaccaaatccggggacgctaccaa
gaaaatgcgaagaggacagtttttctggtgaactcagctctgtctgtagttcagcaggca
gccgcagtccggactcactcagacctccaggtgggagagtacacagatttagaggagacc
tcatcatggactgaccaacagtggagtcaggagataatcgagaatcaggtgttggtcatg
acgtgccacatgttcctgcacgttctgaggaataaaatcttacagttatctaaaatcaac
ctggtggttttcgatgactgtcacctggccatcacagaccacccctactgtgacatcatg
aagctatttgagggctgctcagggagctctcgtatcctgggcctgacagcttctattctg
aacgggaagtgtgacccgtcagaactggagcacaagatccagaacctggagacgatcctg
aagagcaacgcggaaactgccactgacctcgtggtcctggacaggtacgcctctcagccc
agagaggtggttctggactgtggtccctacatggacaagagtggcctctcctccaggctg
caggaggaactcgatgatgctcttcacttcctgaacgactgcaacgtacctgttgccaga
gaggatcgcgaccccacgttcatctctaaacaggtcctgagtgactgccgggccgtgctg
atggtgctgggaccctggtgtgcagacaaggcggcgggcatcatggtgcgggagctccag
aagtacatcaaacacgaacaggaggagctgagccgaaagtttctactcttcaccgacacc
atcctgcgcaaagtgcacgcgctctgcgaggagcacttctcccccgcctcgctcgacctc
aagttcgtcacccccaaagtcctccggctgctcgagatcctgcatgagtacaagcccttc
gagcggcagcagtttgaaagcgtggagtggtacaacaaccgcaaccaggacaactacgtg
tcctggagcgactcggaggatgaagacgaggacgaggaggtggaggtcaaagagaggcct
gaagccaacttcccctcgccatttacaaacatcctgtgtgggatcatctttgttgagagg
agatacaccgctgtggtcctcaaccgtctgatcaaagaggcggggaaacaggacccggag
cttgcttacatcagcagcaacttcatcaccggccacagcatcggcaagaaccagccgagg
aacaaacagatggaggtggagttcagaaaacaagaagaggttctccgtaaattccgcgct
catgaaaccaacctgctgatcgccaccagcatcgtggaggaaggcgtggatatcccaaag
tgtaacctcgtggtgcggttcgacctgcccacagagtacaggtcctacgtccagtccaaa
ggccgggctcgagcccccgtctccaactacatcatgctggctgacagtgagaggaccaaa
tccttcgaggacgatctcaccacctacaaggccatagagaagatcttaaggaacaaatgc
tccaagtcggtggaggtgagcgagtttgaggtggagcaggttctagacgatgacaacatc
ctccctccctacgtgctgcgatctgaggatggaggtccgcgggtcaccatcaacacagcc
atcggacacatcaacaggtattgtgctcggctgcccagtgacccgttcacacacttggct
cccaaatgtcgaacagcggagacgcagaacggacgcttccagtccacgctctacctgccc
atcaactcgcccctcagagttcctatcaagggtcccatcatgaactgtgccagactggca
gagaaagctgttgcactactatgctgtgagaaactccacaaaacaggtgagctggatgat
cacctgatgccggtgggaaaggagacggtgaagtacgaggaggagctggaccttcacgat
gaagaggagaccagcgtaccaggccggccaggatccaccaagaggaggcagtgctaccct
aaagccataccagagtgtttgcgggacagttacgctgtcccagaacagacgtactacctt
tatgtgattgggatggtcctcaccacacctctccctgatgagctcaacttccgcaggagg
aagctgtacccacctgaggacaccaccaggtgcttcggcatcctgactgccaaacccata
cctcgaatcccacatttccctgtgtacactcgctcgggtgaggtgaccatctccatcgag
ctgcagaagtccggcttctctctcaccaccgcccagcttgacctcatcacccgcctgcac
cagtacatcttctctcacatcctccgcctggagaaacctgcactggagttcaagcccacg
ctggctgactcggcgtactgcgttctacctctgaatgttgttggggacaccgacacgctc
gatatggactttacgttcatggaggacattgagaagtctgaggcccgcactggcattcct
accactcagtacaccaagcagaaccccttcaccttcaagctcgaggactaccaggatgct
gtcatcattccaaggtatcgtaacttcgaccagcctcatcgcttctacgtcgctgacgtg
tacacagacctgacgccgctcagcaagttcccttcaccggagtacgagacgtttgcagag
tactacaaaaccaagtacaacctggacctgtccaacctgaaccagcccctcctggacgtg
gaccacacctcctccagactgaacctgttaactcctcggcacctgaaccagaaggggaaa
gccctgccgctcagcagtgcagagaagaggaaggccaagtgggagagtctgcagaacaaa
cagatcctggttccagagctgtgtgccatccacccgatcccggcctccctgtggaggaaa
gctgtgtgtctgcccagcatcctctaccgcctccactgcctcctgaccgccgaggaactc
cgagctcagacagcgagtgaagctggagttggagcccagaccctcccccctgacttcaga
tatccaaacctggactttggctggaagagatccatcaacagcaaaaccttcatcacctgc
tctgattcctgcgatgaggatgctgaggatggtgaggatggtgaggaggatcactgtacg
caccaagagactgaaaccgctgaccctgaccccctcacacatcccagcagcctccactct
tccccctcgaagtccagagaccccccctgcaccaggaacctaaccaacggcactgcccag
gtcgccaactgtgacgacgacggccaccaacacgagcaccttcaccaacatgacaattgc
caatgctcgcagcccgacccccccgggctgcagagccccgaatcaatacaaaccactacc
tcagtttctgtgcagccctctcccagcgtgaagaagcccagctccagtcctccgcagccc
agtgatgaatgtacagcagggaggacctcagaccacaaaaatcaagctacctcagtcagc
agccgagaagctacgggtccccacactcacacagcaccttcccctgacctccccactgtc
ccccagcacagagccgaggcgggggactcccctaaaagcctgggcccaaaccctggcctc
atcctgcaggccctgaccctatccaacgccagtgacggcttcaacctggagaggctggaa
atgctcggagactcttttctcaaacatgccatcaccacgtacctgttctgtacctacccg
gacgctcacgagggacgactcagctacatgaggagcaaaaaggtgagtaactgcaacctg
taccgcctggggaagaagaagggtctccccagcaggatggtggtgtccatctttgacccc
cccgtcaactggctgccccctggatacgtggtcaaccaggacaagagcatccccgataaa
ccggactcagaggaggccaaagaggagctgctggccaacgggcgctctggaaacgacttc
gatgaggaagacgaggaggaggagttggaggaggaggaggaggtggtggaggatgatgct
gagctgatgctgaaggacgagccgaaagatgaagtcaacatggaggacgatctggagtac
tacaaggagcacatcaagttcatcgacaacatgctgctgggatccggtgcgtttggaaag
aagatctctctgagcggcttccctccccccctcaccccggcctcagccgcctcccccccc
atggagtctccctacgagtggaagccccccaaaaaggcccaccatcccaccgcagcccac
ttcccctccgagccggcgcccagcgcaccttctgctgaggagttcgactacagctcgtgg
gacgccatgtgttacctggaccccagtaaagccggagaagaggacgacttcgtggtcggt
ttctggaatccgtcggaggagaactgcggcgccgagctcggcaagcagtccatctcgtac
gacctgcacacggagcagtgcatcgccgacaagagcatcgctgactgtgtggaggctctg
ctgggctgctacctgaccagctgtggagagcgagccgcacagatgttcctctgctcactg
ggcctcaaggtgttgccgttggaaagagggaacctgacgggagcggtggtgcagagccgc
cacacagccatcgacctgtgctacggctggctgaagatcccgccccgcagcctgctggac
catccggacgcagagcggaccctcaaccacctcatctcgggcttcgagaactttgaaagc
aagatcaactacacctttcagaataaggcttacctgctgcaggccttcacccacgcctcc
taccattacaacaccatcacagattgttaccagcggctggagttcctcggtgatgcaatt
ctagactacctcataacaaagcacctttatgaagacccgcggcagcattcccctggcgta
ctgaccgacctgcgctcagctctcgtcaacaacaccatctttgcctccctggctgtcaag
tacgactaccacaagtacttcaaggcgatctcgcccgagctgttccacgtcatcgacgac
tttgtgcagtttcagctggagaagaatgagatgcagggcatggactctgagctgcgtcgc
tctgaagaagacgaggagaaggaggaagacatcgaggtcccgaaggccatgggggacatc
tttgagtctttggctggagccatctacatggacagcaggatgtccctggagacggtgtgg
caggtgtattatccaatgatgaggccactcatagagaaattctctgccaatgtgccacgc
tctcctgtgagggagctgctggagatggaaccagaaactgccaagttcagccccgcagag
aggacgtacgacgggaaggtccgggtgacggtggaggtcgtcggtaagggcaagttcaaa
ggagtgggccgcagctaccggatcgccaagtcagcggcggcgcgtcgagctctgcgcagc
ctcaaagccaatcaacctcaggtccaaaacaactga
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integrated database retrieval system