Labrus mixtus (cuckoo wrasse): 132993386
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Entry
132993386 CDS
T10666
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013
Nucleocytoplasmic transport
lmix03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132993386 (srrm1)
03015 mRNA surveillance pathway
132993386 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132993386 (srrm1)
03041 Spliceosome [BR:
lmix03041
]
132993386 (srrm1)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132993386 (srrm1)
Spliceosome [BR:
lmix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
132993386 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
132993386
NCBI-ProteinID:
XP_060919184
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Position
18:complement(9347250..9356730)
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AA seq
861 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGRNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDEDKKEIRERAQSKSPRRRKTRSPSPRRRSPVK
RERKRSASRSPRRKPSPVGGGSPPPPLMQLPTKPLEQLVEPETSEQRAMPEPVIQETSST
CDNVVEVVKADSVTDVKEPSPEKVHKKEERPRSREKEKDSRRERPHHRSRSHSRSRRRRS
RSRSYSPRRRPSPRRRMSPRRRSPPRRGPPGPRHRHRRSPVRRRRSRSASSSGSSSSGSR
SPKKAMKRISNTPPRKQVLHPDASNSPAGKDRRSQSPRARRGRGSASPARSSGFKRKQGG
RADSPSDNAKPRPSEGSDSEEDKNEKGTTADSVQQRRQYRRQNRQSSSDTGSSSSDDEGP
KRQTAGPGARNGEVRRRRSRTPSPRRRHRDTSPRKRRSPSPPGRRRRSPSPPRRRRSPSP
PRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPVPALKRRLSISPAKRSSPGAKRRFSRSP
KRRSSPAQRRRTPPLSSSPPRHRRSPMLQSVRPSRDTRSPIAAPGRLSPSPANRSRTVRG
SPSPKGRYETSSTSPSNQRRQQSPSHSGKPIRRVSRTPEPHNNQRPSPSPQPMRRASSRS
RSVSPQPAAQKRPAPASASPSPSHSASGSPPPAKKPSSGSGSQSPSKNSDVDGSGKKKKK
KKEKKHKKEKKHKKHKKHKKEKSSGPVTADGQENQGIEEDGESRKESDSEVEDSLDDLEK
HLREKALRSMRKAQMSPSQMS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggcacaagtgcggagcaagacaatcgtttcagcaacaag
cagaagaaactgttgaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccttggattactcaacgagtgacagagattctg
ggatttgaggatgatgtcgtcatagagttcatatttaaccagcttgaggagaagcaccca
gatagcaagatgatgcagatcaacctgacaggtttcctgaatgggaggaatgcccgggag
ttcatgaaggacctgtggcccctgctgctgagtgcccaggagaatattgctggcatcccc
tctgctttcttagaacagaagaaagaggaaattaaacagagacagattgagcaggagaag
cttgcttctctgaagaaggttgatgaggataagaaggaaatccgagagagggctcagtct
aagagcccaaggaggcggaagacaagatcaccgtcaccacggcgaaggtcaccagtgaag
cgagaaaggaaacgcagtgcatcccgctccccgagacgtaaacccagcccagttggtggc
ggttcaccccctccgcccttgatgcaactgcccacgaaacctttggagcagcttgtggag
ccagaaacatcagaacagagagctatgccagaaccagtaatccaagaaacttcttccact
tgtgacaatgttgtggaggtggtgaaagcagactctgtgactgatgtcaaagaaccctca
ccggagaaggttcacaagaaagaagaaaggcccaggtcccgggaaaaagaaaaagacagt
aggagggaaagacctcaccaccgttctcgttctcattcccgctctcgccggcggcgctca
cgttctagatcatactctcctcgtagaagaccgagtccaaggaggagaatgtctcctcgc
cgaaggagtccccctagacgtggtccccctggccccagacaccgccatagacgctcccct
gtccgccggaggcgctctcgctctgcttcatcctctggcagcagctcctctggctctcgc
tcaccaaaaaaagcaatgaaaaggatatccaacacaccaccccgaaaacaggtccttcat
cctgacgcctccaatagccctgcagggaaggacagacggtctcaatctccacgggccaga
agaggcagaggctctgcatcacctgccagatcttctggtttcaagcgtaaacaaggaggt
agagctgattcgccatctgataatgccaagcccagaccttctgaggggtctgattcagag
gaggataaaaatgagaaagggacaacagcagattccgtgcagcagcgacgtcaatatcgc
aggcagaatcgtcagtcttcttcagatacagggtcttcgtcttcggatgatgaggggccc
aagaggcaaacagcagggccaggtgccagaaatggtgaagtcagaagaagacgcagccgt
acgccatccccacggaggcgacacagagatacctctccaaggaaaagacgttctccatca
ccccctggacgcagacgtcgctccccctctcctccccgtcgtcgcagatctccttctcct
cccagacgaaggtctccttccccacctcctcgccgtcgttctccatcccccagacgctat
tctcctcctatccagcgtcgctacagcccctcacctgtgcctgccctgaaaaggaggttg
tctatttctccagcaaagcgctcgtctccaggggccaagcgacggttctccaggtccccc
aagcgcagaagttctcctgctcaaagaagacggacacctccattgtcctcatctccaccc
agacacaggagaagcccaatgttgcaatctgtcaggccaagcagggacacacgatccccc
attgcagcacccggtcgcctctccccatctcctgccaaccgcagtcgcactgtcaggggt
tcacccagtccaaagggacgttatgaaacgtccagtacatccccatcaaaccagcggaga
cagcagtccccttcacatagtggtaaacccatccgcagagtgtcacgcactccagagcca
cacaacaaccagaggccatctccgagtccacagcctatgagaagagcatcctctagatct
aggtctgtttcccctcaaccagcagctcagaaacgtccagccccagcatctgcctcccct
tcaccatctcactcagccagtggttctccgccacctgccaaaaagcccagcagtggatca
ggcagtcaatccccaagcaagaactcggatgttgatggaagtgggaagaagaagaagaag
aagaaggaaaagaaacataagaaagagaagaaacacaagaagcacaagaaacacaagaag
gagaagagcagtggccctgtgactgcagatggacaagagaatcagggcattgaggaggat
ggagagtcaagaaaggaatcagacagtgaagtagaagacagcttggatgacctggaaaag
caccttcgcgagaaggccctgcgctccatgaggaaggctcagatgtctccatcacagatg
tcctga
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