Labrus mixtus (cuckoo wrasse): 132993458
Help
Entry
132993458 CDS
T10666
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013
Nucleocytoplasmic transport
lmix03015
mRNA surveillance pathway
lmix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132993458 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
132993458 (eif4a3)
03015 mRNA surveillance pathway
132993458 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132993458 (eif4a3)
03041 Spliceosome [BR:
lmix03041
]
132993458 (eif4a3)
03009 Ribosome biogenesis [BR:
lmix03009
]
132993458 (eif4a3)
03012 Translation factors [BR:
lmix03012
]
132993458 (eif4a3)
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132993458 (eif4a3)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132993458 (eif4a3)
mRNA cycle factors
Stress granule specific factors
132993458 (eif4a3)
Spliceosome [BR:
lmix03041
]
Complex C
Other components
EJC/TREX
132993458 (eif4a3)
Ribosome biogenesis [BR:
lmix03009
]
Eukaryotic type
90S particles
Helicases
132993458 (eif4a3)
Translation factors [BR:
lmix03012
]
Eukaryotic type
Initiation factors
eIF-4
132993458 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
132993458
NCBI-ProteinID:
XP_060919308
LinkDB
All DBs
Position
2:complement(34927523..34934419)
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAGTQGRKRLLREEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgggacacagggcaggaagaggctcctgagggaggaggacatgaccaag
gtggagtttgagaccagcgaggaggtggacgtcacccctaccttcgacaccatgggtctc
cgggaggacctgctccgcggcatctacgcctacgggtttgagaaaccgtctgcgatccag
cagagagcgatcaaacagatcatcaaaggcagagacgtcatcgctcagtctcagtcggga
acaggaaagacggccaccttctgcgtgtccgtgctgcagtgtctcgacatccaggtgagg
gagactcaagcgctgatcctcgctccgaccagagagctggctggacagattcagaaggtg
ctgttggctttgggagattacatgaacgtccagtgccacgcctgcatcggaggcaccaac
gttggcgaggacatcaggaagctggattacggacagcacgtggtcgcggggacgcccggg
cgtgtgtttgatatgattcgtcgcaggagtctgaggacgagggcgatcaagatgctggtc
ctggacgaggcagacgagatgctcaacaaaggtttcaaggagcagatctacgacgtgtat
cgttaccttcccccggccactcaggtgtgtctgatcagcgccacgctgcctcacgagatc
ctcgagatgaccaacaagttcatgaccgacccaatccgcatcctcgtcaaacgtgatgag
ctcactctagaggggatcaagcagttcttcgtggcggtggagagagaggagtggaagttt
gacactctgtgtgatctgtacgacactctgaccatcacacaggccgtcatcttctgcaac
accaagagaaaggtggactggctcaccgagaagatgagggaggcgaacttcacggtgtcg
tcgatgcacggagacatgcctcagaaagagagagagtccatcatgaaggagttcagatca
ggagccagtcgggtgctgatctccacagacgtgtgggctcgaggtctggacgtccctcag
gtgtctctgatcataaactacgacctgcccaacaacagagagctctacatccacaggatt
ggtcggtccggtcgttacgggcgtaagggtgtggccatcaactttgtgaagaacgacgac
atcaggatcctgcgtgacattgagcagtactactccacccagatcgacgagatgcccatg
aacgtggccgacctgatctga
DBGET
integrated database retrieval system
