Labrus mixtus (cuckoo wrasse): 132994327
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Entry
132994327 CDS
T10666
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132994327 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmix01002
]
132994327 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lmix00536
]
132994327 (shha)
Peptidases and inhibitors [BR:
lmix01002
]
Cysteine peptidases
Family C46: hedgehog family
132994327 (shha)
Glycosaminoglycan binding proteins [BR:
lmix00536
]
Heparan sulfate / Heparin
Morphogens
132994327 (shha)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Vint
Hom_end_hint
Hint_2
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
132994327
NCBI-ProteinID:
XP_060920590
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Position
19:23146300..23155034
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AA seq
416 aa
AA seq
DB search
MLLWTRIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVSLQDGTQKAVKDLQKGDRVLAADGEGNPIYTDFIM
FIDQDSTTRRLYYVIEADSGHRITLTAAHLLFVVGGQNSTEDGGERMSAVFASQIQPGQK
VFVFDADRLEPVTVKRIYTQEHEGSFAPVTMQGNVVVDQVLASCYAVIEDHQLAHWALAP
VRLAHWVSSLFFSSQPRASVQQNDGVHWYSKILYQLGTWLLDSHSIHPLGMSVCPS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgtattggtcggtctcatctgcttgtccttggtgtcctct
gggatgggatgcgggccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagtttatccctaatgtagcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcattttcaaggatgaggagaacaccggtgccgaccggctaatgactcag
agatgtaaagacaagctgaactcgttggccatctcggtgatgaatcagtggcccggggtg
aagctgcgggtcaccgaaggctgggacgaggacggacaccacttcgaggagtcgctccac
tacgagggcagagccgtggacatcaccacctcggacagagacaagagcaagtacggcacc
ctgtccaggctggcggtggaagcaggattcgactgggtctactacgaatccaaagcgcac
atccactgctcggtgaaagcagaaaactcagtggctgctaaatcaggcggctgcttccca
ggatcctccacggtcagcctgcaggacggcacccagaaggcggtcaaagacctccaaaag
ggggaccgggtcctggcagctgatggcgagggaaacccgatttacaccgacttcatcatg
ttcatagaccaggactcgacgaccaggaggctctactacgtcatcgaagccgactcgggc
cacagaatcaccctgacggccgcgcacctcctcttcgtcgtcggcggtcagaacagcacg
gaggacgggggggagaggatgtcggcggtgttcgcgagccaaatccaacccggacaaaag
gtgttcgtgttcgacgccgatcggctcgagcccgtgaccgtaaaacggatttacacgcaa
gagcatgaggggtcatttgcgcccgtgaccatgcaggggaacgtcgtggtggaccaggtc
cttgcgtcctgttacgcagtgatcgaagaccaccagctggcgcactgggctctggcacct
gtcaggctcgcgcactgggtgtcctcgttgtttttcagttcccagcctcgtgccagtgtg
cagcagaacgacggggtgcactggtactccaagatcctttatcaattaggaacatggctc
ttggacagccactcgattcatccactggggatgtcggtatgcccgagttga
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