Labrus mixtus (cuckoo wrasse): 132994605
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Entry
132994605 CDS
T10666
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmix04040
]
132994605 (trpc1)
Ion channels [BR:
lmix04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132994605 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
132994605
NCBI-ProteinID:
XP_060921066
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Position
19:complement(23660697..23678934)
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AA seq
796 aa
AA seq
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MHISVWPYSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNINCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHINKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGTKNTMGPPLEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLDESRNQLSFVMNSLYLATFALKIVANSKFKN
VKDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKDPDKNQTKDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRINYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVVYLVTSMSKWICSHTSKGKVKRQNSL
KEWKNLKQKCDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
accgacgcctcctctccggataaatttctggccttgaaagacgtgagggaggtgaaggag
gaaacgacgctggacgagaagctcttcctgctggcatgtgagaaaggtgactactacatg
gtgaagaagctgctcgaggagaaccgacacggcgagctcaacatcaactgcgtggacgtg
ttgggccgagacgccgtcacaatcaccatcgagaacgagaatctggacatcctgcagctg
ctcctggaacatggctgccaggctacagatgccttgttggttgccatagactctgaggtg
gtcggagccgtggacattcttctaaaccacaggccgaggcgctcttccaagccctccatc
gctaaactgatgcagcgcatccagaacccggagtactccaccaccatggacgtggctccg
gtgatcctggcggcccacaggaacaactacgagatcctgaccatgctgctcaaacaggac
atctcgcttccccggccgcacgccgtcggctgcgagtgcacgctctgcaatgccaaaaac
aagaaggacagcctccgacactccagattccgtctggacatctaccgctgcctggccagc
ccgtctctcatcatgctgaccgaggaggaccccatactcagagccttcgagctcagcaca
gacctcagggagctcagcctcgtggaggtagagttcaggaatgactatgaggagctggca
aagcagtgtaagatgtttgccaaagacctgctggctcaggctcgaaactctcgagagcta
gaagtgattctgaaccacacatccagcgaggatcacatcaacaagaggggcttactggaa
gagcgcatgaacctcagtcgactcaagctcgccatcaagtacaaccaaaaggagttcgtc
gctcagtccaactgtcaacagttcctcaacaccgtctggttcggagagacggccagctac
cgccgcaaacacacctgtctgaagatggccaccgtgctgagcgtggccatgctctggccg
ctgctgtccgtctgctaccttctggtgccgcgctcccgcgtgggccagatcatccacacg
cccttcgtcaagttcatcatccacagcgcgtcctacttcacgttcctcctgctgctcaac
ctgtactcgctggtctacaacgagggcaccaaaaacaccatgggccctccgctggagatg
atagattacctgctcatcctgtggatcatagggatggtgtggtcggacgtgaagcgtctg
tggtacgaggggctggaagacttcctggacgagtctcggaaccagctgagctttgtgatg
aattccctttatctggcgacctttgccctcaagatagttgctaatagcaagttcaagaat
gtgaaggacacagagaggaagaactgggacgccttccaccccatcttggtggctgagggt
ctgttcgcctttgccaatgtgttgagttacctgcgactcttcttcatgtacaccaccagc
tccatactggggcctctacagatctccatgggccagatgctgcaggagtttggcaagttt
ttgggcctcttcctgctggtgttgttctccttcaccatcggactcacacagctctacgga
aaggaccagaaggacccggacaagaaccagaccaaggactgcgagggcattttctgccag
cagcagagcaacgacgcgttccacacgtttatggggacctgctacgccctgttctggtac
atcttctctctggcacatgtcgccctcttcgtcacccgcatcaactacacagaagagctg
cgctcctttgtgggggccatgatcataggcacttacaacattgtggttgtaatagtgctg
accaagctgctggtggccatgctccacaagagcttcagacaaatcgctaatcacgaggac
aaggagtggaagtttgctcgggccaaactgtggctaagctacttcgacgacaagtgcacc
ctgcccccgccgtttaacatcctcccctccccaaagactgtggtctacctggtgaccagc
atgagcaagtggatctgttcacacacctcgaagggcaaagtgaaaagacaaaacagcctc
aaggagtggaagaacctcaagcagaagtgtgatgaaaactaccagaagatcatgtgctgc
ctggttcaccgctacctgacctccacacggcagaagatgcagagcacagatcaggccacg
gtggaaaatctcaacgacctgcgccaagacctctccaagtttcgcaacgagatgagggac
ctgctgggcttccggacctccaaatatgccatgttctacccgaggagctaa
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