Labrus mixtus (cuckoo wrasse): 132994749
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Entry
132994749 CDS
T10666
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132994749 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmix01009
]
132994749 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132994749 (pcdh7a)
Protein phosphatases and associated proteins [BR:
lmix01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132994749 (pcdh7a)
Cell adhesion molecules [BR:
lmix04515
]
Cadherins
Protocadherins
132994749 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
132994749
NCBI-ProteinID:
XP_060921152
LinkDB
All DBs
Position
2:complement(30426244..30478357)
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AA seq
1373 aa
AA seq
DB search
MQRLGAVHSSAAQALSLVVLVLLQLLTQLPGADSALRYRVAEEGPPDVKIGNVAADLGLT
AGTGSGDVTFALESGSEFFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDFEVSV
IGPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNG
IDRYELIQDGGAGSSSTRRTAGGNPITRSDGPGDRRGRSGDIVGGARSTVFELQVADIPD
GEKQPQLIVKGTLDREQKDSYELVLRVRDGGNPARSSQALLRVSITDVNDNSPQFERSTY
EAEMAENAPPGTPVLQVRAADRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRI
DREEVAQLRFTVTARDRGQPPRTDRTTVVLAVRDENDNVPVVEIRKIGRIPVRDGAALVP
ENVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPADEAFDRNKKK
YFLHTSALLDYEVNKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPTFAQSVVEVHF
AENNSPGERVVTVVASDADSGKNAEIAYSLDSAANGPFYIDADNGDIRATGVLDREQRER
YELRVIAKDKGTPSLQGSATVVVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVT
DADEGENAELSLFVEMDGVDDKKVEGEEGQKEREEVFSIENNTGTIFSSASFDRERLSTY
TFRVRAVDGGEPRKTATATVSLFVTDENDNAPSITSPANESYTLLPPASSARTIVRTVTA
LDSDTGPNADLHYALVGGNPFRLFEIGHANGVITLAEPLERRHRGLHRLVVRVNDSGAPS
LCATALVHVFINESLANATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAIGVLA
GAAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPPGAQPQVGRGRGSDRGRKPR
RDKRNGSGVGTTAGGGKSDRSLYSGIVTVNGLRRHANDDDEEDLSSTSERLAARYCVVDG
DPGSPRMGGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQDLPPSNTFVG
SGGCVGSAGSSSSSSGGSGNADAMSLGSDQCSEYGCQTGNKYSKQGTLRRVTFSVVSQPQ
DGGCYDSGLEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQLPDV
ALTGKCTRECDEFGHSDTCWMPVRRSSPRQRQRHGSDPPRLSTFAPGDDNNNLRGNDHES
DSESAGSAGSSEPGVVVGGEAQQRLPLANGDPLGTLGRGDRNRNMGDHNRNLLNRKMTSA
SYDTFSSAGFGRRQPEEEGGEGQNPTEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcttggtgcagtgcactcctccgcggcgcaggctctcagcctcgtggtctta
gtgctgctgcagctgctgactcagctaccgggtgccgactcagctctccggtaccgggtg
gcggaggagggcccgcctgacgtcaagatcggcaacgtggccgccgacctgggcctgacg
gcaggtacagggagcggggacgtcaccttcgcgctggagagcggctcagagttcttcaag
attgacaacgtgacaggtgagctgaccacgggcccgcggcgcatcgaccgggagaagctc
ccacagtgtcagatgatatttgatgaaaacgagtgcttcctggactttgaggtgtcagtg
attggcccgctgcagagctgggtggacctgttcgaaggcagggttgtcatcacagacatc
aatgacaacacaccttccttcccctcacctgtgctccagctgtcagtggaggagaatcgc
cccattgggaccctctacctgctgccaacagcaacagacagagacttcggtcgcaatggc
atagaccgctacgagctgatccaagatggtggagccgggtcaagttcaacgagacgcacg
gcgggaggaaaccccatcacgagaagtgatggccccggggaccggagagggagaagcgga
gatatcgtcggaggagccaggagcaccgtgtttgaactgcaggtcgccgatataccagat
ggcgagaagcaacctcagctcatcgtgaagggcacgttggaccgggagcagaaggactcc
tacgagctggtcctcagggttcgagatggagggaaccctgcacgttcttcccaagccctg
ctccgtgtctcgatcaccgacgtgaatgacaacagcccacagttcgagaggtcgacctac
gaggcggaaatggcagaaaacgctcccccgggtacacctgtcctccaggtgagagcagca
gaccgtgacatcggggtcaacgggcaggtggagtatgtcttcggagccgccaccgaatcc
gtcagacgacttctgcggctagacgaggcaactggatggctgagcgttctccacaggatc
gacagggaagaagtggctcagctgaggttcacggtgacggccagggatcgtggtcagccg
ccccgcaccgaccgcaccaccgtggtgttggccgtccgggacgaaaacgacaacgtccca
gtggtagagatccgaaagattggacggatccctgttcgagacggagcagcattggtgccc
gagaacgtcctggtagacacaccggtggccctcgtgcaggtgtcggaccgagaccaggga
gagaacggggccgtgacctgtacggtcgtgggagacgtcccgttcacattgaagccagct
ggtgagacagctctcccaccgctgcctgcagatgaagcctttgacaggaacaagaaaaag
tacttcttgcatacgtctgccttgctggactacgaggtcaacaaagaatacagtgtcacc
attgtggcagtagattctggcagccccagcctttccagcaacagctcactgatggtgcga
gtggtggacatcaatgatcacgccccaacctttgcccaaagtgtcgtagaggtgcacttc
gctgagaacaactcacctggcgagcgtgtagtcaccgtggtggcctcggacgccgacagt
ggaaagaacgcggagattgcgtactccctggactcggctgctaatgggcccttttacata
gacgcggataatggcgatatccgggccactggggttctggaccgtgagcagcgagagagg
tatgaactcagagttattgccaaggacaagggcactccatccctgcaaggctctgcgact
gttgtggtccaggtgaccgaccgcaatgacaacgcaccaaagtttgttcaggaaatcttc
actttctatgtgaaagagaacttgcttgccaacagccccgttggcatggtcactgtgaca
gatgcggacgaaggcgagaatgcagagcttagtttgttcgtggagatggatggagtcgac
gacaagaaggtggaaggagaggaaggccagaaagagcgggaagaggtgttttccattgag
aacaacacaggcaccatcttctcttctgcatcgttcgaccgtgaaaggctttccacctac
actttccgcgtccgagctgtggatggaggagaaccccgcaaaactgccaccgcgactgtc
tcgctctttgtgacggacgaaaacgacaacgccccttcaatcacctctccggcaaacgag
tcctacacgctccttccgcctgccagcagtgcccgcaccatcgtcaggactgtgacagcc
ttggactcggacaccggcccaaacgctgacctgcactatgccctagtcggaggaaatccc
ttcagactgtttgagattggccacgccaatggagtgatcactctggcagaacctttggag
cgacgccacaggggtctgcaccgcctggtggtccgggtcaatgatagtggggccccctcg
ctttgtgccactgctctggttcatgtcttcatcaatgagagcttggccaatgccaccctt
gtggatgcacaggttgcccgaagtctgatggctccgctctcgctggacatcgcgggcgac
cccgacagcgagcgtgcattggggaaacagcgcctgagcgtggccatcggcgttctcgcg
ggagccgcggcggtcatcctggtcatcctcctcgtggtcacagcgcggcagtgcggcgct
cagggcaagaatggctacgaggcggggaagaaggagccagaggaagacttcttcagtcct
ccgggggctcaaccgcaggttggccgaggcaggggatcggaccggggacgcaagcctcgc
cgagacaaacgcaacgggagtggcgtcggtactaccgcgggaggagggaagtcggacaga
tcgctctacagcggtatcgtcacggtcaacgggctgcgtcgccacgccaacgacgacgac
gaagaggatttgagcagcacaagtgagcgcctggccgcccgctactgcgtcgtggacggc
gaccccggcagcccgcggatgggcggcggcaggagacaccagtcgagcccagatttggcc
agacactacaaatccagctcgcctctccctgcggtcaatctgcagcctcactccccaccg
gcggagggaaagaagcaccaggcggtccaggacctacctccctccaacacctttgtgggc
agcggcggttgtgtggggagcgccggctccagcagcagcagtagcgggggcagtggaaat
gcagacgccatgtccctgggatctgaccagtgctcagagtacggctgccagactgggaac
aagtacagcaaacaggggaccctccgccgggtgaccttctcggtagtcagccagccccag
gacggcggctgctatgacagcggcctggaggactcggagacgccgagcagcaagagctcg
tcggggccgcggctgggagcgctgccgctgcccgaggaggggtacgagcggaccacgccc
gagggcagcgtcggggaggaggagcatgtggagaatgatgccagacagctgccagatgtt
gccctgacaggaaagtgcaccagggaatgtgacgagttcggccactccgacacctgttgg
atgccggtccgccgctcgtccccccgccagcgccagcgccacggcagcgaccccccgcgg
ctctccaccttcgcccccggagacgacaacaacaacctccgcggcaacgaccacgagagc
gacagcgagagcgccggcagcgcggggagctccgagccgggggtggtcgtcggcggagaa
gcccagcagaggttacccttggccaacggggatcccctcggcaccttgggtcggggagac
cgcaacaggaacatgggcgatcacaaccgcaacctcctgaaccgcaagatgacttcggcg
tcctacgacacgttcagcagcgcaggcttcgggaggcgccagccggaggaggaaggaggt
gagggccagaacccgacggaggtcataccgctgactcggacaggaggggactacaagacc
acgtcctgcctcacgttgtcgcgccgcgaggtctacctgtga
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