Labrus mixtus (cuckoo wrasse): 132995364
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Entry
132995364 CDS
T10666
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix00310
Lysine degradation
lmix00514
Other types of O-glycan biosynthesis
lmix01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
132995364 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
132995364 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lmix01003
]
132995364 (colgalt1a)
Enzymes [BR:
lmix01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
132995364 (colgalt1a)
Glycosyltransferases [BR:
lmix01003
]
O-Glycan biosynthesis
O-linked Gal type
132995364 (colgalt1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
132995364
NCBI-ProteinID:
XP_060921294
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Position
20:complement(2307876..2314986)
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AA seq
610 aa
AA seq
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MLGLACLPATLLIWLLSCCGAVRGYFAEERWSPESPLLAPRVLLALICRNSEHSLPYFLG
TIERLNYPKERMALWVATDHNKDNTTVILRDWLVKVQSLYHYVEWRPKEQPSRYEQEEGP
KQWTDQRYEHVMKLRQVALDSAREMWADYFMLADCDNLLTNPDVVWKLMQENKTIIAPML
ESRAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVSMVHSTFLIDLRKEASRQLAF
HPPHPEYSWAFDDIIVFAYSARMADVQMFVSNKETYGYFPVPLRSHNTLQDEADSFIHTL
LEVNVRYPPVMPSNYIPVPRKQPDKLGFDEVFMINLQRRTDRRERMQRALNEQGIECKVI
AAVDGKAMNTSEIQALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIVERRLETSL
VIEDDLRFEIFFKRRLMNLMSEVEDEGLDWDLIYIGRKRMQVDHPEKAVPHIHSLVEADY
SYWTLGYMMSLQGAEKLLKVEPLKKILPVDEFLPIMFDKHPVSDYMEQFETRDLKAFSAE
PLLVYPTHYTGDKGYISDTETSTVWDNDKVRTDWDRARSGKTHEQAEISSEAQNSDVLQS
PLDSTARDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggcttgcgtgcctccccgccaccctgctcatctggctcctgtcctgctgcggt
gctgtccggggatattttgcggaggagcgctggagccccgagtctccgctgctcgctccc
cgggtgctactcgctctcatctgcagaaactccgagcactcgctgccctatttcctcgga
actattgagcgtctcaactatcccaaggaacgaatggctctgtgggtagcaactgaccat
aacaaggacaacactacagtcattttgcgtgactggctcgtcaaggtgcagagcctttac
cattatgtggagtggaggccaaaagagcagcccagccggtacgagcaagaagagggtcca
aagcagtggacggaccagcgttatgagcatgtcatgaagctccggcaggtagccctggac
tcagctcgggagatgtgggcagactactttatgttggccgactgtgataacctcctcacc
aatcccgatgtggtctggaagctgatgcaagagaataagaccatcattgctccaatgctt
gaatcccgtgcagcctattcaaacttctggtgtggaatgacctcacagggctactataag
cgcacccctgcttacatacccatgaggaagcaggtacggaagggctgctttgcggtctcc
atggtccactcaaccttcctcattgacctccggaaagaggcatccaggcagctggccttt
cacccgccacacccagaatacagctgggcctttgacgacattattgtgtttgcctactcg
gctcggatggcagatgtccaaatgtttgtaagcaataaagagacctatggttacttcccc
gtgccactgcgatcccacaatactttgcaagacgaagctgacagcttcattcacaccttg
ctggaggtgaatgtgcgttatcccccagtgatgccatccaattacattcctgttcctaga
aaacaacctgataaacttggctttgatgaggtgttcatgataaacctgcagaggcggaca
gaccgacgagagcgcatgcagagagcattaaacgagcaggggattgaatgtaaggtcatt
gcagctgtagatggaaaagccatgaataccagtgaaattcaggctttgggcatccacatg
ctccctggatacagtgatccataccatggtcgccccctgacaaagggggagctgggatgc
ttcctttcccactataatatctggaaagagattgtggagcgacgtctggaaacctccttg
gtgattgaagacgacctgcgctttgagatcttcttcaaacgtcgcttgatgaatttgatg
agtgaggtggaagatgaaggactagactgggatctcatttacattggccgtaagagaatg
caagtggatcacccagaaaaagctgtgcctcatatacacagcttagtggaagcagactat
tcatattggacactaggctatatgatgtcattacaaggtgcagagaagctcttgaaagta
gaaccactaaaaaagattttgccagtggacgagtttcttcctataatgtttgataaacac
cctgtgtctgattatatggaacagtttgaaaccagagacctaaaggctttctcagccgag
cctcttctggtttatccgacacactatacaggcgacaaaggctacatcagcgacactgag
acctccaccgtgtgggacaatgacaaggtccgtacagactgggacagagcacgctcagga
aagactcacgagcaggcagagatcagctctgaggcgcagaactcagacgtgctccagtca
cctttggacagtacagcacgagacgagctatga
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