Listeria monocytogenes J0161: LMOG_00120
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Entry
LMOG_00120 CDS
T01987
Name
(GenBank) DNA polymerase III
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmj
Listeria monocytogenes J0161
Pathway
lmj03030
DNA replication
lmj03430
Mismatch repair
lmj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMOG_00120
03430 Mismatch repair
LMOG_00120
03440 Homologous recombination
LMOG_00120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmj03032
]
LMOG_00120
03400 DNA repair and recombination proteins [BR:
lmj03400
]
LMOG_00120
Enzymes [BR:
lmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMOG_00120
DNA replication proteins [BR:
lmj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMOG_00120
DNA repair and recombination proteins [BR:
lmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMOG_00120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AEO03658
LinkDB
All DBs
Position
complement(1613895..1617221)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAESTAGYHQLLKIASAIQTREEGPELPQSWLRAYSS
DLIVISPGAKGEIERLLMEEDREGALEVYANLVEIFGKESVYLSAQKENPRLFAKIETFS
SEENVPVVATKNVQYLEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQDEMERDWQ
TAFEKQACLETGELANRCHVEIALDQHLLPRFPLNEGQNASDVLRQTAFAGLKERNLLGM
EYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGVLTGPGRGSAAGSLVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLASILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSKGYSEASANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISM
LAPSINHSNYYFQMENETSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDEFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAA
YVHEVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADTRN
GELQLIINKAEDLKEIKAPVRLFLKLTETQQMEQIKPILARHKGDSKVIVHQAVTKQTAE
LKNIQVSPSNELQEALVELLGKENVVIK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtggggtttgttcatttacaagttgcgagcgcttatgatttgctatctagtacagcgtcc
atcgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtactttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattatcgggatgacggtgacaatacaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcaccagttattaaaaatcgcgagtgct
attcaaacgcgcgaagaaggaccggaattaccacaaagctggttacgagcttatagcagc
gatttgattgttatttcacctggtgccaaaggagaaatcgaacgacttctgatggaggag
gatcgcgagggagcactagaagtttatgcaaatttagtcgaaatttttggtaaagaatct
gtttatttatctgcccaaaaagaaaatccacgtcttttcgcaaaaatagaaactttttct
tcagaagaaaatgtaccggttgttgcgacgaaaaatgtacaatatttagagccaaaagat
gcgcaagcgaaagaagttttaacggccattcgtgataatcgaacagttgactggacgact
ttgccacttgccggaccaaactactttacctcgcaagatgaaatggaacgtgactggcaa
acagctttcgaaaagcaagcgtgtcttgaaacgggagaactcgcaaaccgttgtcatgtc
gaaattgctctggatcaacatttattaccaagatttccgttaaatgaaggacaaaatgca
tcagatgttttgcgtcaaacagcctttgcgggattaaaagaacgaaatttactagggatg
gaatatcaggaacgcttagaatatgaattgaaagttattacagagatggggtttgcagat
tactttctgatagtttgggatgttattcgttattcgcgtgaggcaggagttttaacaggt
ccaggtcggggttctgcggcggggtcccttgtttcctatgcacttagaattacggatgta
gacccgattcgatacaatttgctgtttgagcgatttttaaacccagaacgtatcacgatg
cccgatattgatttggattttccagataatcgccgggatgaagtgatttcgtatgtggta
tctaaatacggagaagcacatgtggcgcaaattggcacatttggaacattggctgctaaa
gcggcgattcgtgatactgcacggagttttggcttgaattccgtactattatcagaatgg
tctaagttaattccgagtcaattaggcattacgctgcaaaaagcattgcaagaaagtccg
cgtttagaaaatcatattaaaagttcaaaagaaaacgaaatgatttgggaagttgcttgt
cagctggaaggcttgccgcgtcatatttcaacgcatgcagcggggatagtaattagtgat
aagccactcgtagaacaagttgcgctacaattgggtagtggagacgcacgtttgacccag
tttgccatgggagaattagagaagattggcttacttaaaatggattttctaggacttaga
aatcttagtttactcgatcgtgttttgaaatcagtcaattatactagagaaactccgtta
acattagcagatatttctttagaggataaaaaaacattgaaactattccaaacaggcgac
acgacaggggtattccaatttgagtcagatgggattcgccgcgtgctccgaaaattaaag
ccaacttcttttgaagatgttgtggcagtagatgcgctttatcgtccgggtccaatggaa
caaattgatacgtttatcgctagaaaacacggaaaagaaaaaattcagtaccctcatcca
gatttagcgtctattttagaagtgacatacggcgttatcgtttaccaagaacaaattatt
caagtggcaaaccaaatggctggattttctcttggagaagcagatttgttaagacgagct
gttagcaagaagaaagcggatgtcctaaacgaggagcggattcactttgtagaaggcgct
aagagtaaaggctattcagaagctagcgctaaccaagtatatgatatgattgtccaattc
gcgaactacggtttcaacagaagtcacgcagcggcctattcaaaaatcgcttttcaatta
gcttacttaaaagcacattttccagccgcgttcatgtcatcacttctcagctcagttttc
ggaaacgatgacaaaatttcccaatacattacagaagcaaaaaactacggaattagcatg
ttagcgccaagcatcaaccatagtaactactacttccaaatggaaaatgagacatctatt
cgttatagtttccgtgttattcgtaaagtgccaaccaaatttattttagaaattattaac
gaacgaaaaaaagcgcctttccgagatttctttgatttttgtgaaagaatgccacataaa
atgctctcagaaactgttttagaagcactcgtattttctggttgttttgacgaatttggt
gaagaccgggcaacgattttggcaacaattgatgcggtattacaatatatctcgttactc
ggtgaagattcgaaagggatgaatcttttcgcggaagatgacgaatttttgaagaagatg
aaaccgagatatcggaaaaccgcacccatttcaattgatgaaaagctggagaaagaaaaa
ttatacactggtcaatatgtttcagcgcatccagtatcgtattatcaaaacaaattgcaa
aaccttgcaatcacaagacttgcaaacctttcttctggcaaaaattatcaagtagctgcc
tatgtacacgaagtaaaatcaattaggacaaaaaaaggcgaaacgatgtgctttttaaca
attagtgatgactccaaagaactgagtgcagtgatgttcccagaaagttaccgtaaattc
gctaattttgcacaaaaaggggaaatcctctttttgcaagtgaaagcagatacgagaaac
ggggaactccaattaattattaataaagcagaagatttaaaagaaattaaagccccagtt
agattatttttaaaattaacagaaacacagcaaatggagcaaattaaaccgattttagcg
cgtcataaaggggatagtaaggttatcgtacatcaagcggtaacgaaacaaacagcagag
ctgaaaaatattcaagtatcgccatcaaacgagttgcaagaagcgttagtagagctgctt
ggtaaagagaatgtagtcattaagtaa
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