Listeria monocytogenes J0161: LMOG_01458
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Entry
LMOG_01458 CDS
T01987
Name
(GenBank) helicase c2 domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lmj
Listeria monocytogenes J0161
Pathway
lmj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LMOG_01458
09124 Replication and repair
03420 Nucleotide excision repair
LMOG_01458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmj03021
]
LMOG_01458
03036 Chromosome and associated proteins [BR:
lmj03036
]
LMOG_01458
03400 DNA repair and recombination proteins [BR:
lmj03400
]
LMOG_01458
Enzymes [BR:
lmj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LMOG_01458
Transcription machinery [BR:
lmj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LMOG_01458
Chromosome and associated proteins [BR:
lmj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LMOG_01458
DNA repair and recombination proteins [BR:
lmj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LMOG_01458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
Helicase_C
ResIII
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
AEO02228
LinkDB
All DBs
Position
157180..159519
Genome browser
AA seq
779 aa
AA seq
DB search
MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRI
VDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLA
EVTLQLTYYQVVDKEVKQFQRVMSREELSVFVEDLLSQYAIWAKASAAWEMKRNKTIQEL
TFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFY
FTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLN
EALFDMLQSEEAITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRF
FAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINVMNKD
MIALNKKLKDLDETIYVQKNELIDWNESVLKFTFVAKEWLPQNTQSEIQADVLELYFESL
RYIAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYY
TNLLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALVSGENGN
YLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVL
GGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVL
QAVGRVIRGESDRGVVLLIEERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtgcgtatttcagttaggcgtttagtagagtttgtgcggagaagcggtagt
atcgataaccggatgactagttcagaccgcgccttagaaggaacaaaaattcatcaatta
ctccaaaaagaagctggggaagaatatgctgcagaggtacggctaaacctagaccgaata
gtggacggaattgctttttcgcttgatggacgcgcagatggcatcataaatggccgaatg
attgatgaaattaaaacaactgagacgccaatggatgaaattaccgaaaattttcgacct
cttcactgggcgcaacttatttgttatggatttatgcttgcagaaaagtccgatttggca
gaagttactctacaattaacgtattatcaagtagttgacaaagaagtaaaacaatttcaa
cgtgtaatgagtcgcgaggaactgagcgtttttgtggaagatttactttcccaatacgct
atttgggcaaaggcatctgccgcttgggaaatgaaacgaaataaaacaattcaagaatta
acgtttccatatgacagctatcgaagtgggcaaagagagcttgccattgcagtgtaccga
acaatatcttcagaagaaagtttgttttgtgaagcacccacaggtatcggcaaaacaatg
tcgaccttgtttcccggtattaaagctatgggtgaagggaaaacggataaattgttttac
tttactgcaaaaactattacgcggcaagttgccgaagatgcgctagatgagatgcgtcgt
aaaggacttgctgcaaggagtgttacaataactgcgaaggataagatatgctttttagac
gagaggaaatgtgaaccagatcattgccaatttgcgcgaggttattatgatcgtttgaac
gaagcattgtttgatatgttgcaatccgaagaagcaattacccgtcaagttgttgagagt
tatgcccggaaatacacactttgtccatttgaattatcgctggatgtggctcttttttgt
gatgtaatagtttgtgattataattatttattcgacccggtagtctacttgaaacgtttc
tttgcagaagggccaggtaaatatacttttctggttgatgaagtgcataatttagtagac
cgtgcgcgctcgatgtactcagcgacattaaaaaaatctgcagttatgcaagtcaaacgg
ggactggacgcaaaaaataacaagcgattgctaaatgcaatcaatgtgatgaataaagac
atgatcgcactcaataaaaaactaaaggatttagatgaaactatatatgtgcaaaaaaat
gaactcattgattggaatgaatcggtcctaaaattcacctttgtagcgaaggaatggttg
ccgcaaaatactcagtcagaaatacaagcggatgtgttggaactttattttgaaagtttg
agatatattgcaattgcggatttttatgatgatcgttacgtcacacaagtaacgaaaagc
cacggagatttagaaataaaacaagtatgcttggatccgtcgttcttattatcagaaaga
ctgaaactcggaagcagctcggtgctcttttcagcaacgcttcgaccaatagattactat
acaaatttacttggtggtcaagaagacacgagtagaatgattttttcttcaccatttaaa
caaaaaaacatgcatttactagtagcggattatattagtacgaaataccaaatgcgtgaa
aatagtatggaagctgtcgtagatgctctctatgctctagtctctggggaaaacggcaac
tatttatttttctttccatcatttctatatttacaaaaggtatacgatttatttaaagaa
aaatatcctaacatcaggttgcaaaaacaagaaactgctatggatgaagagcgacgggag
cattttttagaaagatttcaagcagagaatgtagaaaccttgattggcttttgcgtctta
ggaggcgttttttcagaaggggtagatcttcgtggcaaccgattagtcggtgcggcagtt
gttggagtaggacttgcgcaactgaatcacgaatctgatttaattaaagattattataat
gaaacgattggtcggggatttgattatgcatatcagataccaggaatgaataaggtgctt
caagcagttggccgggttattcgaggagaatcggaccgtggcgtagtgttgttaatagaa
gaacgattttctgccgatcgttaccgagcattattccctacgcactggaaccatgcgaaa
acagtgaagagcacagatgatatctcccgagaagtggccggattttggcggaatagctaa
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