Listeria monocytogenes J0161: LMOG_02307
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Entry
LMOG_02307 CDS
T01987
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lmj
Listeria monocytogenes J0161
Pathway
lmj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOG_02307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmj03021
]
LMOG_02307
03019 Messenger RNA biogenesis [BR:
lmj03019
]
LMOG_02307
Transcription machinery [BR:
lmj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LMOG_02307
Messenger RNA biogenesis [BR:
lmj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMOG_02307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_22
AAA
AAA_25
Mor
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AEO04650
LinkDB
All DBs
Position
complement(2635719..2636990)
Genome browser
AA seq
423 aa
AA seq
DB search
MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEI
IPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEA
VNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLIVAPPK
AGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIK
VAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMR
RSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEM
FKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctaaactctccattgcatacttagaaagcttaacaattaaagatatatattcccta
gctaaagaacataagattgcttattatagtaagcttaccaaacgagaacttatttttgct
ttacttaagtcaaacgccgaaaaagaaggtttcttttttatggaaggtgtcttggaaatt
attccgaatgagggatttggttttttacgacctattaattattcctctagctcggaagat
atttatatttccgcttctcaaatcagacgttttgaattaagaacgggagacagagtttca
ggaaaagttcgtccaccaaaagaaaatgaacgttattttggtttactgcatgttgaggca
gttaacggagaaaacccagaagtagcgaaagaaagagtgcattttcctggtttgacgcca
ctttatccggatcgtcaaattcatttagaaacagaaaaatatccaatttcaacacgtaca
attgatttgattgctccaattggatttggacagcgtggacttattgtagcgccaccaaaa
gcagggaaaactgttttgctcaaagaaattgcgaatgcgattacgactaatcatccagat
actgaattgattgttttgctaatagatgagcgtccagaagaagtaactgatattgagcgc
tctgtaaaagcggatgtagtcagttccacatttgacgaagttccagaaaatcatattaaa
gttgcagaacttgtgcttgaacgcgcaatgagattagtggagcaaaaacgcgatgtagtt
attttgatggacagtatcacgcgtctcgcacgagcgtataatttagttataccaccaagt
ggccgaacactttcaggggggattgacccagcagcttttcatagaccaaaacggtttttt
ggagcagcacgaaatatagaagagggcggtagtttaacaatccttgctactgcgttagtt
gacacaggctcacggatggatgatgttatttacgaagaattcaagggtactgggaacatg
gaattgcatcttgatcgtcaacttgctgaacgtcgtgtctttcctgcgattgatatgcgt
cgatctggaacaagaaaagaagaacttttattatccaaagaacgcttagaacaactatgg
aaaatccgtaaagccatgccaaaacaaggtgatggacttgatatttcagaacgctttgtc
cgttacttaaagaaaaccgacaacaatgaagctttttatgaattactacaagaggaaatg
tttaaaaaataa
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