Leuconostoc mesenteroides KFRI-MG: LMES_0172
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Entry
LMES_0172 CDS
T02997
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lmk
Leuconostoc mesenteroides KFRI-MG
Pathway
lmk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMES_0172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmk03021
]
LMES_0172
03400 DNA repair and recombination proteins [BR:
lmk03400
]
LMES_0172
Enzymes [BR:
lmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMES_0172
Transcription machinery [BR:
lmk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMES_0172
DNA repair and recombination proteins [BR:
lmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMES_0172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
dATP-dGTP_PPHyd
Motif
Other DBs
NCBI-ProteinID:
AHF18388
LinkDB
All DBs
Position
181743..182687
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AA seq
314 aa
AA seq
DB search
MIEFEKPNIHNIEEDARYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVNTVQIDGVV
HEFSTVDGVVEDVTQIILNLKKVVLAIDSDDERSLEIDIQGPADVTAADLQGGADVEVLN
PDLHIATVAAGKSLHMTVTAVKGRGYTSADENKKLRDEMPIGVLAVDSIYTPIERVNYQV
ENTRIGARDDYDKLTFDIWTNGSVKPSDALSLGAKILAEHLGLFMDISPVAAEASVMVEA
EPVAASASDSAPIEDLDLSVRSYNCLKRAGINTIVELTDRTEADMMKVRNLGRKSLDEIQ
EKLTDMNLGFRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaagccaaatattcataacatcgaagaggatgcccgctacggcaaa
tttgttgtagagcctcttgagcgtggatatggtacgacacttggtaactcgttgcgtcgt
atcttattgtcttcgcttcctggcgcagccgttaatacggtgcaaattgacggcgtggtt
cacgagttttcaaccgtggatggcgttgttgaagatgtcacacaaattatcttgaacctc
aagaaggttgtgttggcgattgactcagatgatgaacgttcacttgaaattgatattcaa
gggccggcagatgtaacagctgcagatttgcagggtggtgctgatgttgaagttttgaat
cctgatttgcatatcgctactgtggcagcaggtaagtcattacatatgacagtcacggcg
gtcaaaggtcgtggatatacatcagctgatgaaaataagaagttacgtgatgaaatgccc
attggtgttttagccgttgattctatttatacacctatcgaacgtgtaaactaccaagta
gaaaacacacgtatcggtgcgcgtgacgactatgataagcttacttttgatatttggaca
aatggttctgtcaaaccaagtgatgccttaagtttgggtgctaagatcttagctgagcat
cttggtttgttcatggatatttctcctgtagctgctgaagctagtgttatggttgaagca
gagcctgttgctgctagtgcatcagattctgcaccaattgaagatctagatttatctgtt
cgctcatataattgtctcaaacgggccggtatcaacactattgtagagttgacggatcgc
actgaagctgacatgatgaaagtgcgtaacctcggtcggaaatcacttgacgaaatccaa
gaaaagctcactgatatgaacttaggatttcgcaaggaagattaa
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