Leuconostoc mesenteroides KFRI-MG: LMES_0622
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Entry
LMES_0622 CDS
T02997
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lmk
Leuconostoc mesenteroides KFRI-MG
Pathway
lmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMES_0622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmk03400
]
LMES_0622
Enzymes [BR:
lmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LMES_0622
DNA repair and recombination proteins [BR:
lmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMES_0622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
OB_YrrC
HHH_RecD2
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
SLFN-g3_helicase
AAA_12
AAA_22
HHH_5
NPHP3_N
TrwB_AAD_bind
ORC-CDC6-like
AAA_16
UvrD_C
nSTAND3
TIP49
AAA
AAA_28
PIF1
TraI_hel_assoc_N
RsgA_GTPase
UvrD-helicase
Helicase_RecD
Cullin_Nedd8
Gal11_ABD1
NACHT
Zeta_toxin
AAA_29
NTPase_1
AAA_5
AAA_7
TsaE
Baculo_gp41
Motif
Other DBs
NCBI-ProteinID:
AHF18838
LinkDB
All DBs
Position
662018..664405
Genome browser
AA seq
795 aa
AA seq
DB search
MAYPEKQLDKITGTLQNVIFSSTESYFKILSVHIEESTLEDWQEPEMIATGTFADVQEGS
VYGFYGQLVRHPKYGQQFKVDHYENELPPDENGLIKYFASGQFTGIGKKTAEKIVNHLGL
NAVNLILDDAKILDGIVKAETARKLARTLRLNLGLERLFQIGNQFGIGADIAGRLYDQYG
NEAQDILTQDPYRLVFEFDGISFKKADDIGHKVGVDKFDERRMQAAVYATIMNVTFQYGH
MFLSHDQLLLSVEQMLHQNNTEMSNQIQKAIQSLIESNILVNDDGRYYAKRLYIAEKETA
INLKRLLNTSSPLNITANDINESFVTPGQMTLDQTQVEAVKTGLKSQIFLLTGGPGTGKT
TIIRTMVATWKKMIQNRAKFADNTKDFLKNYQVRMASPTGRAAKRMTEVTGYDASTIHRL
LGIADLDEPEFNADNPIAGGLLIIDEASMLDIELTSKLLAAVPNGMKVIIVGDSDQLPSV
GPGNVLEDLVSSGDITHIELEVIYRQGRGSSITELATHIKNGELPADFLENQPDRSSFMV
NSEQASQAIEQVVALAIKKGYTQDDLQILTPMYKTSAGVIALNQMAQKLFNPLKSNQKSL
QFGMTIFRKGDKVLQLENDSERDVYNGDMGKIIAVQYKSDIGNDDNEDRLIIDFDGKELA
YPKKNLNQLSLAYATTVHKAQGNEFQLVIMVLTNHFGLMLNRNLLYTGITRAKEALILVG
EYTAFERASRTLVPKRFTFLQQRLSHSKTEVNEHDSSDESETIPEKTPHLTTTMVISSAV
NPMIGMENITPYDFM
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcatacccggaaaaacaattagataaaataactggcacgttacaaaacgttattttt
tcatcgacagaatcctattttaaaattttgtcggtacatattgaagaatcaactttagaa
gattggcaagagccagaaatgattgccactggaacatttgctgacgtccaagaaggaagt
gtatacggattttatggccaattggttcgacatccaaagtacggacagcaatttaaagtc
gatcattacgaaaatgaactgcctcccgatgaaaacgggttgattaagtattttgctagt
ggccaatttactggaattggtaaaaaaacggctgaaaaaattgttaatcatttgggattg
aatgctgtcaatctaattctagatgatgcaaaaattcttgacggtattgtaaaagcagaa
acagctcgaaaactggcgcgtacgttgcgacttaacttaggtctagaacgcttgttccaa
attggcaatcaatttggtattggtgcggacattgccggacgtttatatgatcaatacggt
aacgaggcacaagacattttaacgcaagatccttaccgtttagtatttgaatttgatggc
attagttttaaaaaagccgatgatattggtcataaggttggtgtagataaattcgatgaa
cggcgtatgcaagccgctgtttacgcaacaattatgaatgtgacgtttcaatatggtcat
atgtttttatcacacgatcaactattattgtcggtcgagcaaatgttgcatcaaaacaat
accgaaatgtcgaatcaaattcaaaaggccatccagagcttaattgaaagcaatattttg
gttaacgatgatggccgttattatgcgaaaaggttgtacattgctgaaaaagaaacggct
attaacttaaaacgattattaaatacaagttctccattgaatataacagcaaatgatatt
aatgaatcatttgtgacgcctggacaaatgacgctcgatcagacacaagttgaggcggtt
aaaactgggttgaaatcacaaattttcttgttaacaggtggaccaggaactggaaaaacg
acaattatccgcacaatggtcgccacttggaagaaaatgattcaaaatcgtgcaaagttt
gcagacaatactaaagattttctcaaaaattatcaggtcagaatggcttcaccaacagga
cgtgcagcaaagcggatgaccgaggtaacgggttatgatgcttcgacaatccatcggcta
ctgggtattgctgatttggatgagccagagtttaatgcggataatcctatcgcaggcggt
ctactaataatagatgaagcgtcgatgctagacattgaattaacttcaaaattgctagca
gcggttccaaatgggatgaaggtaattatcgtcggagatagcgatcaactaccgtcggtt
ggaccaggcaatgtattagaggatttagtgagtagcggagatatcactcatattgaatta
gaagttatctatcgacaaggccgtgggagcagtattactgaacttgcaacgcatattaaa
aacggtgagttaccagcagatttcttagagaatcaaccagatcgttcgagttttatggta
aattcagagcaagcttcgcaagcaattgaacaagtggttgcattggcgattaaaaaaggt
tacacgcaagacgatttacaaatattaaccccaatgtacaaaacatctgccggtgtaatt
gccttaaatcaaatggctcaaaaattgttcaacccgcttaaatcaaatcaaaaaagtttg
cagtttggaatgacaattttccgaaagggtgataaggtcttacagctagaaaatgacagc
gagcgagacgtttataacggagatatgggcaaaataattgctgtccagtacaagtctgac
attggcaatgatgataatgaagatcgcctcatcattgattttgatggtaaagaattggct
tatcccaaaaaaaatttgaatcaactgtcattagcgtacgctacgaccgtccataaagca
caaggtaacgagtttcaattggttattatggttttgacaaatcattttggtttaatgctt
aatcgaaatttattgtatacaggaattaccagagccaaagaggctttgattcttgtggga
gaatacaccgcatttgaacgtgcttcacgcacactggtgccgaaaagattcacattcctg
caacaaaggttgagtcacagcaaaactgaagttaatgagcacgatagttcagatgaatcg
gaaactatccctgaaaaaacacctcatttgacaacaacaatggttattagtagtgcggtt
aatccgatgatcggaatggaaaatattaccccatatgatttcatgtaa
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