Listeria monocytogenes L99 (serotype 4a): lmo4a_2491
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Entry
lmo4a_2491 CDS
T01989
Symbol
uvrB
Name
(GenBank) excinuclease ABC, subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lml
Listeria monocytogenes L99 (serotype 4a)
Pathway
lml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lmo4a_2491 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lml03400
]
lmo4a_2491 (uvrB)
DNA repair and recombination proteins [BR:
lml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lmo4a_2491 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
lmo4a_2491 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA
HEM4
UB2H
AAA_30
AAA_7
AAA_19
DUF5662
AAA_22
DUF87
AAA_5
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
CAR85195
LinkDB
All DBs
Position
complement(2550510..2552486)
Genome browser
AA seq
658 aa
AA seq
DB search
MKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTGKTFTVSNVIQEVNKPT
LVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEID
KLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVSLRVGMEISRDQLLRKLVDIQ
YDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGEREH
VSIFPASHFVTRPDIMKKAIVNIKAELEDRLQVLRADNKLLEAQRLEQRTNYDLEMMEEM
GYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQM
LVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDP
IVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVK
TLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNENGRVIMYADKMTDSMRNSIGETERRRKIQIEYNEKHGITPKTIKKEIRGIIAATS
AADEREAVKQHDLSKMSKKERDVFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggataaatttgagttagtttctaagtatagcccacaaggagaccaacctagagca
atagaacaattagttgcgggattaaaaaaaggcttgaaacaccaaactttacttggtgca
accggtacagggaaaacttttaccgtatccaatgtgattcaagaagtaaataagccgaca
cttgtcatggctcacaataagacgttagcgggacagctgtatagcgagtttaaagaattt
ttcccaaataacgcggtagaatattttgtcagttactatgattactatcaaccagaagcc
tatgttccacaaagtgacacatatatcgagaaagatgccagcattaatgatgaaatagat
aagcttcgtcactctgctacggctgcgctttttgaacggcgtgatgtgattatcattgcc
agtgtatcgtgtatttatggcttaggttcgccgatcgaatatggagagatgctcgtttcg
cttcgtgttggcatggaaattagccgtgatcagctactgcgcaaattagtagatattcaa
tatgatcgaaatgatatagattttcaacgtgggcgcttccgtgttcgcggtgatgttgtc
gaaattttcccggcatcaagagacgagcactgcatgaggattgaatttttcggtgatgaa
attgaacggattagagaggtagatgcacttactggcgaaattattggagaaagagaacat
gtttctatttttccggcatctcactttgttaccagacctgatattatgaaaaaagcaatt
gttaatataaaagcggaactcgaagaccgcctccaagttttgcgtgcagataataaatta
ctcgaagcacaacgtcttgaacaacggacgaattatgatttagaaatgatggaagaaatg
ggttattgctctggtattgagaactattctagacatttatcccttcgtccagcgggagtt
acaccatacacgttactcgattacttcccagacgatttccaaatggtaattgatgagtca
cacgttacgatgccgcaaattcgtggtatgtttaacggtgaccaagccagaaaacaaatg
ctagttgatcatggctttagattgcctagcgctctagataaccggccgcttcgtttagaa
gaatttgaaaagcatatcaatcaaattatgttcatttccgccacaccaggcccttatgaa
ctagaaaaaaatccggatgttattgaacaaatcatccgaccaaccggcttgctagatcca
atcgtagaaattcgcccgattcaaggacaaatcgatgacttaatggatgagattaatgat
cgtgtcgagaaaaacgaacgtgttttaatcaccactttaacgaaaaaaatgtcagaggat
ttgaccaactatctcaaagaagcaggcgtcaaagtacaatatcttcactcggaagttaag
acgctagaacgaattgaaatcattcgggaccttcgacttggagtgtatgatgttatcgtt
ggaattaacttgctccgtgaaggaatcgacttacctgaagtatctcttgtcgccatttta
gatgcagacaaagaaggattccttcgttccgagcgttccttaattcaaacaatgggtcga
gcggctcgtaatgaaaacggtcgagtaatcatgtatgctgataaaatgaccgattcgatg
cgcaattctatcggcgaaacagaacgccgtcgtaaaatccaaattgaatataatgaaaaa
catggcattacgccaaaaacaatcaaaaaagaaattcgtggtatcatcgcagcgacttct
gccgcagatgaaagagaagcagtgaagcaacatgatttaagcaaaatgtctaagaaagaa
cgcgatgtgttcattgaaggtatggaacatgaaatgaaagaagcagccaaagcacttgat
ttcgaacgtgctgctgaacttcgcgatgctttactggaaataaaagcggaaggatga
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