KEGG   Listeria monocytogenes L99 (serotype 4a): lmo4a_2823
Entry
lmo4a_2823        CDS       T01989                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
lml  Listeria monocytogenes L99 (serotype 4a)
Pathway
lml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    lmo4a_2823 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lml03019]
    lmo4a_2823 (recQ)
   03400 DNA repair and recombination proteins [BR:lml03400]
    lmo4a_2823 (recQ)
Enzymes [BR:lml01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     lmo4a_2823 (recQ)
Messenger RNA biogenesis [BR:lml03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     lmo4a_2823 (recQ)
DNA repair and recombination proteins [BR:lml03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      lmo4a_2823 (recQ)
SSDB
Motif
Pfam: RQC HRDC DEAD Helicase_C RecQ_Zn_bind Helicase_Sgs1 ResIII zf-CXXC DNA_pol_A_exoN
Other DBs
NCBI-ProteinID: CAR85527
LinkDB
Position
complement(2872962..2874734)
AA seq 590 aa
MIEQARAILQQNFGYQDFRNGQVDVISKLCAGEDTLAIMPTGGGKSLCYQIPALLFDGLT
IVVSPLISLMKDQVDALVSEGIAATFINSTLTNREIDIRLDAAFSGELKMLYIAPERIET
PGFQRLIEQVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLDKMTRRPLVIALTATATQA
VSDDICRLLKIGVDSVVKTGFSRDNLAFQVVKGQDKDKYLIDYLTKNVTESGIIYASTRK
EVERLHSFLLKKGVESGMYHGGMTDLARKDWQEKFLYDDIRVIVATNAFGMGINKSNVRF
VIHYNIPRNIEAYYQEAGRAGRDGVPSDCILLFSPQDSRIQQFLIEQSEMDDERKQNEFA
KLRQMTGYGYTEICLQKYIVQYFGDDEENCEKCSNCLDTREATDVTILAQQVFSCIKRMG
ERFGKVLIAKVLTGSADQKVKDWRFDELSTYGLMKDASQKDVLQLIDYLTAEKYLQPTDS
QFPSLKLTDRAVSVLRGELKVERKQAKRAEKVKIDVNSDLFEKLREVRRELAAKHKVPPY
IIFSDETLREMCAYMPQTEDALLEVKGIGAMKRDKYGAEFLAVLQQEASK
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgatagagcaagcaagagctattttacagcaaaactttggttatcaagattttcggaat
ggacaagttgatgtcatttcgaaactttgcgcgggagaagatacgttagcaatcatgcca
acgggtggcgggaagtcactttgttaccaaatcccagcacttctttttgacggtttgacc
attgttgtttctccactaatttcacttatgaaggatcaggtagatgcgctagtctcagag
gggattgcagctacttttattaatagtacactgactaatagagaaatagatattcggctg
gatgctgcattttcaggtgagttaaagatgctttacattgctccagaacgcattgaaaca
ccaggttttcagcgtttaattgagcaggtacctatttcattatttgcgatagatgaggcg
cactgtatttcgcagtggggtcatgattttcgtcctagctacctgacgctgtgcgatagt
ttggataaaatgaccagacggccgctcgttatcgcgcttactgctacagcaacgcaggct
gtttcagacgatatttgccgattgttaaaaataggagtagattcagtcgttaaaactgga
ttttccagagataatttggcttttcaagtagtgaaagggcaagataaagataagtatttg
attgattatttaacaaaaaatgtaacggaatccggaattatttatgcttcgactcggaaa
gaagtagagcggctgcacagtttcttgctaaaaaaaggcgttgaatctggtatgtatcat
ggcggaatgaccgatttagcacggaaagactggcaagagaagtttctatatgatgatatt
cgagtgattgtggcgacgaatgcgtttggaatgggaattaataaatctaatgtgcgtttt
gttattcattataatattccgcgcaatattgaagcgtactatcaagaggcgggtcgtgct
gggcgagacggggttccaagtgattgtatcttgttgttttccccgcaagatagccgcatc
cagcagtttttaattgaacaatccgaaatggacgatgagcgcaaacaaaatgagttcgct
aagctacgccaaatgacggggtatggttatacggaaatttgtttacagaaatacatcgtg
cagtattttggagacgacgaggaaaactgcgagaaatgtagtaattgcttagatactagg
gaagccacggacgttacaattttagcgcaacaagttttttcttgtataaaaagaatgggt
gagcgttttgggaaagtattaattgccaaggttttgacaggttctgctgaccagaaagtg
aaagattggcgctttgacgaactcagtacctatggattgatgaaagatgcttcccaaaaa
gatgtgttacaactaattgattaccttacagcagaaaaatatttacaaccaactgatagt
caattcccttccttaaaactgacggatagagccgtttcggttttacgaggcgagctaaaa
gtggaaagaaaacaagcgaaacgggctgaaaaagttaaaatagatgtaaatagtgacctt
ttcgagaaattgcgggaagtgcggcgggaactggcagcaaaacacaaggtgccgccatat
atcattttttcagatgaaacgttacgtgaaatgtgtgcatatatgccacaaacggaagat
gcactgcttgaagtcaaaggcattggtgcgatgaaacgcgataaatacggtgcagaattc
ttggctgtactgcaacaagaggcatcgaaataa

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