Leuconostoc mesenteroides subsp. mesenteroides J18: MI1_07445
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Entry
MI1_07445 CDS
T01768
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lmm
Leuconostoc mesenteroides subsp. mesenteroides J18
Pathway
lmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MI1_07445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmm03019
]
MI1_07445
Messenger RNA biogenesis [BR:
lmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MI1_07445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
MctB
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
AET30931
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Position
complement(1550721..1552277)
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AA seq
518 aa
AA seq
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MVVTIISVFFAIVIGLGIGYYVRKSQDAHKVISAEQMATNILEQANNEAKSLKRAAEVDA
KDLAQTYRNQINDSYNDRQKHLQQQEQRLEDRINNLDKKDAALNQRDASLIQKENQVQTR
LDDADKKEVLAQKLLTTQQDKLEEIAQLSPDEAKKQILSETKASLTRQRAALIKEAEEEA
TSEAEKRARNIIVQAIQRSSADSVADVTVSVVNLPSEDMKGRIIGREGRNIRTLESLTGI
DLIIDDTPESVVLSGFDPVRREIAKMALDALVADGRINPSRIEEMVEKSRRQMDETIREK
GEQAVFELGLRGMHPDLIKMIGRMNYRTSYGQNVLQHSIEVAKLAGMMAAELKMDVALAK
RAGLIHDIGKAVDAEVEGSHVELGVRLAEKFNEKPIVINAIASHHGDVAAISPIAELVAA
ADAISAARPGARSESLENYVQRLKDLEAIANNYQEVHTAYAIQAGREVRVIVEPTKVTDL
QAKVLAHDIKSDVEEKLEYPGHIKVTVIRETRAIDYAH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggtagttacaatcatttcagtgtttttcgcaattgtgattggtcttggtattggatac
tatgtgcgcaagtcacaagacgcgcataaagttatttctgccgagcaaatggcaactaac
attcttgaacaagcaaataatgaagctaaaagtttgaaacgtgcagcagaagttgatgct
aaagatttggcacaaacttatcgaaatcaaattaatgattcgtataatgatcgtcaaaag
catctgcagcaacaagaacaaaggctagaagatcgcatcaataacctcgataaaaaagat
gcggccttgaatcaacgtgatgcatcattgattcaaaaagaaaatcaagtacagacacgc
cttgatgacgcagataaaaaagaagtattagcacagaagttgttgactacacaacaagac
aagttggaagaaattgctcaactgtctcctgatgaagctaagaaacaaattttaagtgaa
actaaagcaagtttgactcgtcaacgagcagccttgattaaagaagcggaagaagaagcg
actagcgaagctgagaagcgtgctcgtaatattattgtgcaagctattcaacgttcctca
gctgattctgttgctgacgtgactgtctctgttgtcaatttgccaagtgaagatatgaag
ggaagaattattggtcgtgaaggccgtaatattcgtactttagaatccctaactggcatt
gatttaattattgatgatacaccagaatcagtcgttttgagtggatttgatcctgttcga
cgtgaaatcgcaaaaatggcattagatgccttagttgcggatggtcgaattaatccgtct
cgtattgaagaaatggttgaaaaatcacgacgtcaaatggatgaaacgattcgtgaaaag
ggtgaacaagctgtctttgaactaggattacgaggcatgcacccagacttaattaagatg
atagggcgtatgaactatcgaacttcatacggtcaaaatgtgctccagcattcaatcgag
gtcgcaaaacttgcgggaatgatggcagcagagcttaaaatggatgtcgcgcttgcgaaa
cgcgctggattaatacacgatattggaaaagcagttgatgctgaggtcgaaggttcccat
gtggaattaggcgttagattagctgagaagtttaatgagaagccaattgtaatcaatgca
attgcttctcatcatggtgatgttgcagcaatctcgccgattgctgagttagtagctgcg
gctgatgctattagcgctgctcgtccgggggctcgtagcgagtcactagaaaattatgtg
caacgtttaaaggatcttgaagcgattgcaaataattatcaggaggttcacacagcatat
gctattcaagcaggtcgagaagtacgcgtgattgttgaacctacaaaggttacagacttg
caagctaaagtattggcacacgacattaagtcggatgtcgaagaaaaactggaatatccc
ggacatattaaagttacggttattcgagaaacacgtgcaattgactatgcacattaa
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