Leuconostoc mesenteroides subsp. mesenteroides J18: MI1_07945
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Entry
MI1_07945 CDS
T01768
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lmm
Leuconostoc mesenteroides subsp. mesenteroides J18
Pathway
lmm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MI1_07945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmm03021
]
MI1_07945
03400 DNA repair and recombination proteins [BR:
lmm03400
]
MI1_07945
Enzymes [BR:
lmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MI1_07945
Transcription machinery [BR:
lmm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MI1_07945
DNA repair and recombination proteins [BR:
lmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MI1_07945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AET31031
LinkDB
All DBs
Position
complement(1651624..1655286)
Genome browser
AA seq
1220 aa
AA seq
DB search
MAIDVNKFESMQIALASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDYE
CACGKYKRIRYKGIVCDRCGVEVTSSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLD
MSPRSLEEIIYFASYVVIEPGDAPVEKKQMMTEREYRQLKKEYGAGFKAGMGAEAIKELL
ANVDLATEADELKRELQEATGQKRVRAVRRLDIIEAFLQSDNKPEWMVMEVIPVIPPDLR
PMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPFLKMNQMGLPV
PMAIELFRPFIMKELTTRKLAGNVKSAKRKIDKADGDVMDVLEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLVSGKAMRLHPLVTEAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAGHI
LAPKDGKPIVAPSQDMVIGNYYLTTEEAGREGEGMIFSSVDEARIAFASKVVHYHTRVGI
QTSSFPSEKPFTDEQRSKIMITSVGKLFFNEILPSDLPYINEPSEDNFKRVDDSFFIDAG
ENIHDYLADTSIVNPFKKGFLSDIIAEVYKRYKVTETSLLLDRMKDLGYDKSTESGLTVS
MTDVLELEEKPAILEDAHSQVATVTKQFRRGLITDSERYQRVTEIWTKAKDIIQDKLIES
FEPTNPIFMMQDSGARGNISNFVQLAGMRGLMAGPGGKIIELPVTANFREGLTVMEMFIS
THGARKGMSDTALKTANSGYLTRRLVDVAQDVIVREFDNDSDRGVAVQAIMDGTSVVEPL
YDRILGRYAMKSVFDPETDEKIVSRNEMIDEDVAKKIVNAGIKEVTIRSVFTSTTEHGVS
VLDYGRNLASGEEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGGNDITQGLPRVQE
IVEARIPKGRAEISEVTGTITVIEENPADRTKSVTIEGETDTRTYTLPLTTRMRFGEGDE
IKRGEAINEGPIDPKELLAVTDTLTTESYMLTEIQKVYRLQGIEVSDKHIEVMIRQMLRK
IRVMDPGQTDLLPGTLMDIADFKRANEPALFEGLVPATARPVLLGITKAALETNSFLSAA
SFQETTRVLTDAAIRGKNDPLVGLKENVIIGKIIPAGTGMAEYRKIKSKVVGDVIAQPES
ESEEASDIPKLDDVAKTFDN
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgatgttaataaattcgaaagtatgcaaatcgctttggcttcccctgataag
attcgttcatggtcttatggtgaagtaaagaagccagaaacgattaactatcgaacactt
aagccagaaaaagacggtttgttcgatgaacgtattttcggacctacaaaagattatgaa
tgtgcctgtggtaagtacaagcgaatccgatataagggtattgtttgtgaccgctgtggt
gttgaagtaacatcatcaaaagttcgtcgtgaacgtatgggtcacatcgaattagctgct
cctgttacacatatttggtatttcaagggaattccttcacgtatgggacttgttttagac
atgtctccacgttcacttgaagaaattatatattttgcttcttatgttgttattgaacca
ggtgatgcacctgttgaaaagaagcaaatgatgacggaacgtgagtaccgtcaactgaaa
aaagaatatggtgctggctttaaggctggcatgggcgcagaagcaatcaaagaattactt
gcaaacgttgatttagctacggaagctgatgaattaaagcgtgaattgcaagaagcaaca
ggacaaaaacgagtacgtgcggtacgtcgtttggacattattgaagcctttctccagtca
gataacaaacctgaatggatggtaatggaagttattccagttattcctcctgatttgcgt
ccgatggttcaattggaaggtggccgttttgccacgtctgatttgaatgatttatatcgc
cgtgttatcaaccgtaacaatcgtttgaagcgtttgcttgatttgaatgcgccaggcatt
atcgtgcaaaatgaaaagcgtatgttacaagaagctgttgatgcgttgattgataatggt
cgtcgtggtcgtccggttgctggtccaggtaatcgtccattgaaatcactttcacacatg
ttgaagggtaagcaaggtcgtttccgtcagaacttacttggtaagcgtgttgattattct
ggtcgttcggttattgatgttggacctttcttgaaaatgaaccaaatgggattgcctgta
ccaatggctattgaactattccgtccatttatcatgaaagaattaacaacacgtaagttg
gctggcaatgtcaagtctgctaaacgcaagattgataaagctgacggcgacgtgatggat
gtcttggaagatgttatcaaggaacaccctgttcttttgaaccgagcacctacattgcac
cgtcttggaattcaagcgtttgagccagtgttagtttcaggtaaagcaatgcgtttgcac
ccattggttactgaagcctataacgccgatttcgatggtgatcagatggccatccacgta
ccattatctgatgaagcacaagctgaagcgcgtttgttaatgcttgctgctgggcatatt
ttggcacctaaagatggaaagccaattgttgcgccatcacaggatatggttattggaaac
tactatttgactactgaagaagccggtcgtgaaggcgaaggaatgatcttctctagcgtt
gatgaagcacgaattgcttttgcaagcaaggttgttcattatcatacacgagtaggtatt
cagacttcttcatttccaagcgaaaagccatttactgacgagcaacgttcaaagattatg
atcacttcggtaggtaagttattctttaacgaaatcttgccttcagatctcccatatatc
aacgaaccatcagaagataactttaagcgagttgatgatagtttctttattgatgctggt
gaaaatatacatgattatttggctgatacatcgatcgttaatcctttcaagaagggcttc
ttgtcagatattatcgctgaagtatataagcgttataaggtgacagaaacttcattattg
ttggatcgtatgaaagatttgggttacgacaagtctactgaatctggtttaacagtgtca
atgacggatgtattggaattagaggaaaaacctgctattcttgaagacgctcatagtcaa
gttgccacagtaacaaagcagttccgtcgtggtttgataactgattcggaacgttatcaa
cgtgtaaccgaaatttggacaaaagccaaggatattattcaagacaagttgattgaatcg
tttgaaccaacgaaccctatctttatgatgcaagattctggggctcgaggtaacatttcg
aacttcgttcaattagctggtatgcgtggattgatggctggacctggtggtaagattatt
gaattgccagttacagctaacttccgtgaaggtttgacagtgatggaaatgtttatttct
actcacggagctcgtaagggaatgtcagatacggccttgaagacagctaactcaggttac
ttgacacgtcgactagttgatgtggctcaagatgttattgtacgtgagtttgacaatgat
tcagatcgtggtgttgctgttcaagcaattatggatggcacatctgtggttgaaccattg
tacgatcgtattctcggtcgttatgcaatgaagtctgtatttgaccctgaaacagatgaa
aagattgtttcacgtaatgaaatgattgatgaagatgttgccaagaagattgtgaatgct
ggcattaaagaagtaactattcgttcagtctttacatcaacaacggaacacggtgtttca
gtgcttgactatggtcgaaacttagcatctggtgaagaagttgaagttggtgaagccgtt
ggaactgttgctgcacaatcaatcggtgagccaggtacgcaattgacaatgcgtaacttc
cacacgggtggagttgccggtggtaatgatattacgcaaggtttgcctcgtgttcaagaa
attgttgaggcgcgtattcctaagggacgtgcagaaatttctgaagttacgggtacaatt
actgtgattgaagaaaatcctgcagaccgcacaaagtcagttacaattgaaggcgaaact
gatacaagaacttatacattacctttgacaacacgtatgcgttttggtgaaggtgacgaa
attaagcgtggtgaggctatcaacgaaggaccaattgatcctaaagagttgttagctgtt
acagacactttgacaacagaatcatatatgctaactgaaattcaaaaggtttaccgtttg
caaggtattgaagtttctgacaaacatattgaagtaatgattcgtcaaatgttacgtaaa
atccgcgtcatggatccaggtcaaacggacttgttgccaggaacattaatggatatcgct
gatttcaagcgcgctaacgaaccagctttgtttgaaggcttagtaccagcgactgctcgt
ccagttctgttgggaattactaaggctgcgcttgagacaaattcattcttatctgccgca
tccttccaagaaacaacacgtgttttgacagatgctgctattcgtggcaaaaacgatcca
cttgttggtttgaaagagaacgttattattggtaagattattcctgccggaactggtatg
gctgaatatcgtaagatcaagagtaaagttgtcggggatgttatcgctcaacctgagtct
gaaagcgaagaagcttcagatattcctaagttagacgatgttgcaaaaacatttgacaac
taa
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