Listeria monocytogenes 08-5578 (serotype 1/2a): LM5578_0334
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Entry
LM5578_0334 CDS
T01157
Name
(GenBank) hypothetical protein
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
lmn
Listeria monocytogenes 08-5578 (serotype 1/2a)
Pathway
lmn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lmn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LM5578_0334
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lmn01001
]
LM5578_0334
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lmn02022
]
LM5578_0334
Enzymes [BR:
lmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LM5578_0334
Protein kinases [BR:
lmn01001
]
Histidine kinases
OmpR family
LM5578_0334
Two-component system [BR:
lmn02022
]
OmpR family
VicK-VicR (cell wall metabolism)
LM5578_0334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Cache_WalK
HisKA
HAMP
PAS
PAS_9
PAS_8
dCache_1
HATPase_c_3
PAS_4
HATPase_c_2
GAF_PdtaS
CovS-like_HAMP
DUF7088
sCache_like
Motif
Other DBs
NCBI-ProteinID:
ADB67090
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Position
339731..341563
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AA seq
610 aa
AA seq
DB search
MHKMRFFQSVQFKLVIMYLLLIIVAMQVIGAYFVRELEGQLEKNFQDSITNSITLLDYNA
REEIIKNSDNSVKLQNDIRELLVDYSRASSNLIEVRIVDDKGKILGTSNLNNQGIVGQKS
NDPLVKRTLSLGTTSEDKIYKDESNKNNRVWVNVSSIKNKGQVIGAIYLVADIESVYKQV
DDITNIFITGTLIAMIITAVLGILLSRTITKPIVEMKRQAYAMARGNYSRKVKVYGVDEI
GELADSFNTLTKRVQEAQAMTEGERRKLSSVLAYMTDGVIATDRRGKVILINTPAEKMLR
VKHESANGRSIIDVLDIGDTYQFEDLMEVDGSLTMDRSTLDKPYVLRANFSVIQRETGFN
NGVIAVLHDITDQEKVDQERRDFVSNVSHELRTPLTSMHSYLEALSDGAWEDKEIAPRFL
EVTQNETERMIRLVNDLLKLSRMDGGREQLEKSFVNFTDFFNHIIDRFEMMKKETIMFKR
HIPREPVIIEIDEDKVMQVLDNIISNANKYSPDGGRISFYLKKFEDEIEVSIADEGLGVP
DEDLANVFDRFFRVDKARSREMGGTGLGLAIAREVIEAHGGRIWAERNKNKGTIIKFTLP
YSDLPEDDWE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaatgagattttttcagtccgtacaatttaagttagttattatgtatttgcta
ctaattatcgttgcaatgcaagtaatcggcgcgtattttgtacgtgaactggaaggacaa
ctggagaaaaattttcaagattctattacaaatagtattaccttgctggattataatgct
agagaagaaattattaaaaatagcgacaactccgtcaagttacaaaatgatattagagaa
ctcttagtcgactattcgcgtgcaagcagcaacttaatcgaagtaagaatagtagatgac
aaaggaaaaattctcggaacatcgaatttaaataaccaaggaattgttggccaaaaaagc
aacgatccacttgtaaaacgaacattatcacttggaacgacttccgaggacaaaatctat
aaagatgaatcaaataaaaataaccgcgtttgggtgaatgtatcctccatcaaaaataaa
ggccaagtgataggggctatttatcttgtcgctgatattgaaagcgtatataaacaggta
gatgatattaccaatattttcatcacaggtactttgattgcgatgattattacagccgtc
cttggaattctattatcgcgaaccattactaaaccgattgtcgaaatgaaacgtcaagct
tatgcgatggctcgcgggaactatagccgcaaagttaaagtatatggtgtcgatgaaatt
ggggaactggccgattcttttaatacgttaacgaaacgagtccaagaagcccaagcaatg
actgaaggggaacgacgcaaattatcttcagtactcgcatatatgaccgatggcgtaatt
gcaaccgaccgccgcgggaaagtaattctcattaatacgcccgcagaaaaaatgctccgc
gtgaaacatgaaagtgcgaatggacgctcgattattgatgttttagacatcggggacacg
taccagttcgaagatttaatggaagtggatggttcgttaacaatggaccgtagtactctc
gacaaaccttacgtgcttcgtgccaatttctcggttattcaaagagaaactggctttaac
aatggggttatcgcggtacttcacgatattacagatcaagaaaaagtggaccaagaacgt
cgcgacttcgtatccaatgtatcacatgaactaagaaccccacttaccagtatgcatagc
tatttagaagcattaagcgacggcgcgtgggaagataaagaaatcgctccacgtttcctt
gaagtaacgcaaaatgagaccgagcgaatgattcgtctcgttaatgacctgctcaaactt
tccagaatggacggcggcagggaacaactagaaaaaagtttcgtgaactttacagacttc
tttaaccatattattgaccgttttgaaatgatgaaaaaagaaacaatcatgttcaaacgc
catattccaagagaaccagtcatcatcgaaattgatgaagataaagtaatgcaagtgctt
gataatattatttctaacgccaataaatattcaccagatggtggccgcatttcgttctat
ctgaaaaaatttgaagatgaaattgaagtgagcattgccgatgaaggtttaggcgtacca
gacgaagatttagcaaatgtattcgaccgattcttccgcgtagacaaagcgcgctcgcga
gaaatgggaggaacagggttaggactcgctattgctcgagaagttatcgaagcacatggc
ggtcgaatttgggccgaacgtaataagaataaaggaaccataattaaattcaccctgcca
tacagtgacttaccggaggatgattgggaatga
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