Listeria monocytogenes 08-5578 (serotype 1/2a): LM5578_1467
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Entry
LM5578_1467 CDS
T01157
Symbol
truB
Name
(GenBank) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lmn
Listeria monocytogenes 08-5578 (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmn03016
]
LM5578_1467 (truB)
Enzymes [BR:
lmn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LM5578_1467 (truB)
Transfer RNA biogenesis [BR:
lmn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LM5578_1467 (truB)
Prokaryotic type
LM5578_1467 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6210
Motif
Other DBs
NCBI-ProteinID:
ADB68216
LinkDB
All DBs
Position
1425761..1426675
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AA seq
304 aa
AA seq
DB search
MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVT
DEGKVYVAEITLGKSTTTEDATGETVMTKELADISADELQAALTKLTGKITQIPPMFSAV
KVNGKKLYEYARAGIEVERPSRQVDIYSLTRLDGEATLNEANPTFQLEISCGKGTYIRTL
AVMVGELLGYPAHMSKLERTRSGFFKKEDCLTLAEIDEMMQASDSSFLYPLEKGIESMAK
LVIDEEIHAKVLNGSLLPKSLFIEVENEPRAALIFKDKLTAIYKPHPEKKDLWKPEKVIE
LNQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcattatcccactgtggaaagaacgcgggatgacaagtcatgattgcgttttt
aaattaagaaaaattttacatacgaaaaaagttggacacactggcacgctggatccagaa
gtagagggtgtacttccaatttgtatcggccgtgcgacgaaactagcagaatacgtaaca
gatgaaggaaaagtctacgtagcagaaataactttaggcaaatcgactacaacggaagat
gcgactggtgaaacggttatgaccaaggaattagcagacatttccgctgatgaacttcaa
gccgcactcactaaattgactggaaaaattactcaaattccccctatgttttctgctgta
aaagtcaatggcaagaaattgtatgaatatgcaagagctggtatagaggtagaacgtcca
tccagacaagtggatatttattcgttaactcgcttagatggtgaggctacgctaaatgaa
gcgaatccgacttttcagttagaaatatcttgtgggaaaggtacttatattcgcacgctt
gcagttatggttggcgaattattaggatatccagcgcacatgtccaaactagaacggact
cgtagcggctttttcaaaaaagaagattgcttaacgctggcagaaattgacgaaatgatg
caagcgagtgatagcagctttttatatccacttgaaaaaggcattgaatccatggccaaa
ttagtgattgatgaagagatccatgcgaaagttttaaatggcagccttttaccaaaatca
ttatttatagaggtagagaatgagcctcgtgccgcgcttattttcaaagataaattaaca
gctatttataaaccacatccagagaaaaaagacctttggaaaccagaaaaggtcatcgag
ttaaatcaagcatag
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