Listeria monocytogenes 08-5578 (serotype 1/2a): LM5578_1711
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Entry
LM5578_1711 CDS
T01157
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmn
Listeria monocytogenes 08-5578 (serotype 1/2a)
Pathway
lmn03030
DNA replication
lmn03410
Base excision repair
lmn03420
Nucleotide excision repair
lmn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LM5578_1711 (polA)
03410 Base excision repair
LM5578_1711 (polA)
03420 Nucleotide excision repair
LM5578_1711 (polA)
03440 Homologous recombination
LM5578_1711 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmn03032
]
LM5578_1711 (polA)
03400 DNA repair and recombination proteins [BR:
lmn03400
]
LM5578_1711 (polA)
Enzymes [BR:
lmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LM5578_1711 (polA)
DNA replication proteins [BR:
lmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LM5578_1711 (polA)
DNA repair and recombination proteins [BR:
lmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LM5578_1711 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LM5578_1711 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
LTD
NYN_YacP
XPG_I
Enkurin
FeoB_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ADB68459
LinkDB
All DBs
Position
complement(1672084..1674711)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNLTPEQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS
KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEESKELKELS
FEIVTELKEQHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEAFRKW
VESDQTKVVYDAKKTIVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFTSVAVRHDYTE
VETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEKNEQLALMEDLELPL
TFVLAEMEMQGVSVDTDRLEDMKVELGGRLKTLEASIHSLAGEEFNINSPKQLGVILFEK
LELPPVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattaattgatggaaatagtattgcgaatcgcgctttttatgcgtta
ccacttttaaataacgataaaggtgtttacacaaatgcggtgtatggattcgcaatgatg
ttgatgaatgtactcgaaaaagaaaaacccagccatgtgctcgttgcatttgatgctgga
aaaacaacttttagacatacaacatttaaaggttataaaggcggacgtcaaaaaacccca
agtgagttatctgaacagtttccattcatccgagagcttttaacggcgtatgatatcccg
caatatgaactggccaattacgaggcagacgatattatcggaacattgacgaaaaaagcg
gaagcagatggaatggaagttgcaattattaccggagaccgcgatttaacacaattagct
tctgaaaaaacaacggtttatattactaaaaaaggcatagccgatatggaaaccaacaca
ccagaaacactaaaagaaaaatacaatctaactcctgaacaaatcattgatatgaaaggt
ttaatgggagattcctccgataatattcctgggattccaggcgttggtgaaaaaacagcc
ttaaaactcttacatgaatttggcggaacggtggaaagtgtgttagagcacgccgaggaa
atttccggtaaaaaactaaaagaaaaagtactagaaaataaagaattagctattttaagt
aaagagctagctacaatcaatgtggattcaccgattgaatgcacagtcgaaagcacgaaa
tatgacgggtatcaaactgaaaaagttatccctttattaaaagaaatgaattttacaaca
cttttgaaaaatatcgaaggagatacaccggaggaatcgaaagaactaaaagaattgtct
tttgaaatagtaacggaattaaaagaacaacattttggtgggaaaaccgcactttatgtg
gagctagaaaatgataattaccatacagcaaacttcatcgggctgacagtacattccagc
caaggaacgtatttctttacaaaagaaacagctgaaagtagtgaggcattccgcaaatgg
gtagaaagtgatcaaacaaaagtagtgtatgatgcgaagaaaacaatagttgcaatgaac
cgcattggtttggcaatttctggtatcacatttgatatcatgttagcatcttacttgtta
aatccatctgattcaattgatgattttacaagtgttgcagtaagacatgattacacagaa
gtagaaacagatgaagcagtctacggaaaaggtgctaaacgtagcactcctgaagaaagc
attgttgcggcacacttagctaggaaagcagtggccattgctgacttagagaaaagacta
gttgatgatttagagaaaaatgaacaactagctttgatggaagacctagagctaccacta
acatttgttttagcagaaatggagatgcaaggagtcagcgtagatacagatcggcttgaa
gatatgaaagtagagctgggtggaagactaaaaacattagaagcatccattcattcacta
gctggcgaagaattcaatattaattcaccgaaacaactaggtgtaattttatttgaaaag
ctggaacttcccccagtcaagaaaacaaaaacaggctattcaacagctgcggatgtactg
gaaagtttgtctggaaaacacgcgattattgatgaaattttgttatatcgtcaacttggt
aaaattcagtccacttatatcgaagggctgcttaaagtgacggataaagaaacacataag
gtccatacacgtttcaaccaaacattaacgcaaacgggacgtttaagttcagtcgatccg
aacttacaaaatatcccgattcgtttagaagaaggtcggaaaatcagacaagtttttgtg
ccgagtaaacctggttggaaaatgttttcagccgattattctcaagtagagttgcgagtt
ttagcacatatttctgaagatgagaatttaatttatgcatttaagcacgattacgatatc
catacgaaaacagccatggacgtgtttcatgtggagaaggaagaagtggattcactaatg
cgccgtcaagctaaagcagtaaactttggtattgtatatggtattagtgattatgggctt
tcgcaaaaccttggtattacgcgtaaagaagcaaaagactttattgatcgttactttgtg
agttatccagccgtgaaagaatatatgcaagacattgtccgttttgcgaaagaaaaaggc
tatgtagagaccattttacatcgtcgtcgttatattccggagattgttagtcgtaatttt
aatgttcgcggatttgcagaaagaactgcgatgaacacacctattcaaggtagtgccgct
gatattatcaaaaaagcgatgattctgatgagcgagcgtttagtatctgaaaaattagaa
gcaaaattattacttcaagtgcacgatgaattaatcttcgaagcacctgaagctgaaata
gctaaattagaagaaattgtcccagatgttatggaaaatgcagtagagctttctgtgccg
cttaaagtagatagcgcctttggtgacacttggtacgacgcgaaataa
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