Listeria monocytogenes 08-5578 (serotype 1/2a): LM5578_1720
Help
Entry
LM5578_1720 CDS
T01157
Symbol
dnaE
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmn
Listeria monocytogenes 08-5578 (serotype 1/2a)
Pathway
lmn03030
DNA replication
lmn03430
Mismatch repair
lmn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LM5578_1720 (dnaE)
03430 Mismatch repair
LM5578_1720 (dnaE)
03440 Homologous recombination
LM5578_1720 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmn03032
]
LM5578_1720 (dnaE)
03400 DNA repair and recombination proteins [BR:
lmn03400
]
LM5578_1720 (dnaE)
Enzymes [BR:
lmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LM5578_1720 (dnaE)
DNA replication proteins [BR:
lmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LM5578_1720 (dnaE)
DNA repair and recombination proteins [BR:
lmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LM5578_1720 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
DUF655
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
ADB68468
LinkDB
All DBs
Position
complement(1683760..1687086)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAESTAGYHQLLKIASAIQTREEGPELPQSWLRAYSS
DLIVISPGAKGEIERLLMEEDREGALEVYANLVEIFGKESVYLSAQKENPRLFAKIETFS
SEENVPVVATKNVQYLEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQDEMERDWQ
TAFEKQACLETGELANRCHVEIALDQHLLPRFPLNEGQNASDVLRQTAFAGLKERNLLGM
EYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGVLTGPGRGSAAGSLVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLASILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSKGYSEASANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISM
LAPSINHSNYYFQMENETSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDEFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAA
YVHEVKSIRTKKGETMCFLTISDDSKELSAVMFPECYRKFANFAQKGEILFLQVKADTRN
GELQLIINKAEDLKEIKAPVRLFLKLTEPQQMEQIKPILARYKGDSKVIVHQAITKQTAE
LKNIQVTPSNELQEALGELLGKENVVIK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtggggtttgttcatttacaagttgcgagcgcttatgatttgctatctagtacagcgtcc
atcgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtactttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattatcgggatgacggtgacaatacaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcaccagttattaaaaattgcgagtgct
attcaaacgcgcgaagaaggaccggaattaccacaaagctggttacgagcttatagcagc
gatttgattgttatttcacctggtgccaaaggagaaatcgaacgacttctgatggaggag
gatcgcgagggagcactagaagtttatgcaaatttagtcgaaatttttggtaaagaatct
gtttatttatctgcccaaaaagaaaatccacgtcttttcgcaaaaatagaaactttttct
tcagaagaaaatgtaccggttgttgcgacgaaaaatgtacaatatttagagccaaaagat
gcgcaagcgaaagaagttttaacggccattcgtgataatcgaacagttgactggacgact
ttgccacttgccggaccaaactactttacctcgcaagatgaaatggaacgtgactggcaa
acagctttcgaaaagcaagcgtgtcttgaaacgggagaactcgcaaaccgttgtcatgtc
gaaattgctctggatcaacatttattaccaagatttccgttaaatgaaggacaaaatgca
tcagatgttttgcgtcaaacagcctttgcgggattaaaagaacgaaatttactagggatg
gaatatcaggaacgcttagaatatgaattgaaagttattacagagatggggtttgcagat
tactttctgatagtttgggatgttattcgttattcgcgtgaggcaggagttttaacaggt
ccaggtcggggttctgcggcggggtcccttgtttcctatgcacttagaattacggatgta
gacccgattcgatacaatttgctgtttgagcgatttttaaacccagaacgtatcacgatg
cccgatattgatttggattttccagataatcgccgggatgaagtgatttcgtatgtggta
tctaaatacggagaagcacatgtggcgcaaattggcacatttggaacattggctgctaaa
gcggcgattcgtgatactgcacggagttttggcttgaattccgtactattatcagaatgg
tctaagttaattccgagtcaattaggcattacgctgcaaaaagcattgcaagaaagtccg
cgtttagaaaatcatattaaaagttcaaaagaaaacgaaatgatttgggaagttgcttgt
cagctggaaggcttgccgcgtcatatttcaacgcatgcagcggggatagtaattagtgat
aagccactcgtagaacaagttgcgctacaattgggtagtggagacgcacgtttgacccag
tttgccatgggagaattagagaagattggcttacttaaaatggattttctaggacttaga
aatcttagtttactcgatcgtgttttgaaatcagtcaattatactagagaaactccgtta
acattagcagatatttctttagaggataaaaaaacattgaaactattccaaacaggcgac
acgacaggggtattccaatttgagtcagatgggattcgccgcgtgctccgaaaattaaag
ccaacttcttttgaagatgttgtggcagtagatgcgctttatcgtccgggtccaatggaa
caaattgatacgtttatcgctagaaaacacggaaaagaaaaaattcagtaccctcatcca
gatttagcgtctattttagaagtgacatacggcgttatcgtttaccaagaacaaattatt
caagtggcaaaccaaatggctggattttctcttggagaagcagatttgttaagacgagct
gttagcaagaagaaagcggatgtcctaaacgaggagcggattcactttgtagaaggcgct
aagagtaaaggctattcagaagctagcgctaaccaagtatatgatatgattgtccaattc
gcgaactacggtttcaacagaagtcacgcagcggcctattcaaaaatcgcttttcaatta
gcttacttaaaagcacattttccagccgcgttcatgtcatcacttctcagctcagttttc
ggaaacgatgacaaaatttcccaatacattacagaagcaaaaaactacggaattagcatg
ttagcgccaagcatcaaccatagtaactactacttccaaatggaaaatgagacatctatt
cgttatagtttccgtgttattcgtaaagtgccaaccaaatttattttagaaattattaac
gaacgaaaaaaagcgcctttccgagatttctttgatttttgtgaaagaatgccacataaa
atgctctcagaaactgttttagaagcactcgtattttctggttgttttgacgaatttggt
gaagaccgggcaacgattttggcaacaattgatgcggtattacaatatatctcgttactc
ggtgaagattcgaaagggatgaatcttttcgcggaagatgacgaatttttgaagaagatg
aaaccgagatatcggaaaaccgcacccatttcaattgatgaaaagctggagaaagaaaaa
ttatacactgggcaatacgtttcagcgcatccagtatcgtactatcaaaataaattacaa
aaccttgctattacaagacttgcaaatctttcttccggcaaaaattatcaagtggctgct
tatgtacacgaagtcaaatcaattagaacaaaaaaaggcgaaacgatgtgctttttaaca
attagtgatgattcaaaagaattgagcgccgttatgtttccggaatgttaccgtaaattc
gctaactttgcacaaaaaggagagatcctctttttgcaagtgaaagcagatacgagaaac
ggggaactccaattaattattaataaagcagaagatttaaaagaaattaaagccccggta
cgattattcctaaaattaacggaaccacagcaaatggaacaaattaagccgattttagcg
cgttataaaggcgacagtaaggtcattgtgcatcaagcgataacgaaacaaactgctgaa
ctgaaaaatattcaagtaacgccatcaaatgagctgcaagaagctttaggagagttgctt
ggtaaagagaatgtagttattaagtaa
DBGET
integrated database retrieval system
