Listeria monocytogenes 08-5578 (serotype 1/2a): LM5578_1951
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Entry
LM5578_1951 CDS
T01157
Name
(GenBank) hypothetical protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lmn
Listeria monocytogenes 08-5578 (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmn03009
]
LM5578_1951
Enzymes [BR:
lmn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LM5578_1951
Ribosome biogenesis [BR:
lmn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LM5578_1951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
PrmA
TRM5-TYW2_MTfase
RrnaAD
MTS
Methyltransf_15
Methyltransf_32
Methyltransf_11
TPMT
DOT1
DUF2023
Motif
Other DBs
NCBI-ProteinID:
ADB68698
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Position
complement(1938597..1939958)
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AA seq
453 aa
AA seq
DB search
MEASLLKKNQSIELTIEDLTHDGSGVGKIDGYPFFIPNTLPGEKVTAKIIKLNKNYGFAR
MENIETVSANRVEPPCAVYSKCGGCSLQHLSYDGQLEFKRNQVEETMKRIGKLNVEVPET
LGMENPWRYRNKSQVPVGFVNGKLTAGFYQKRSHAIIDMSTCLIHNEQGDFAVQKTREIL
AKYGTEPYDEQTGKGDIRHIMTRFAHTTGQLMIVLVTTKERMPFKEEIVRDLVEQLELTS
IVQNINPHKTNVIFGDRTKTLWGKDIIEDTIHGIRFAISARSFYQVNPLQTEVLYQQAID
AAELTGEETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNELANTTFET
GKAEEVIPAWYKAGIVADVLVVDPPRKGCDEKLLETILAMKPKKVVYVSCNPGTLARDMK
ILTDGGYVAKKVQPVDMFPMTTHIEAVTVLHLN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcatcccttttaaaaaagaaccaatctattgaacttactattgaagatttaacg
catgacggcagtggggttggcaaaattgacggatacccatttttcattccaaatacgtta
cctggcgaaaaagtgacagcaaaaataataaaattaaataaaaattatggttttgctcgg
atggagaatattgaaactgttagtgcaaatcgtgtagagcctccttgtgcggtttattcc
aaatgtggcggttgtagtttgcaacatttaagctacgatggccagcttgaattcaaacga
aatcaagtggaagaaacgatgaaacgcattggtaaactaaacgtagaagttcctgaaacg
ctaggtatggaaaacccgtggcgctaccgtaataaatcacaagtaccggtaggttttgtt
aatggtaagttaacagctggcttttatcaaaaaagaagccatgccattattgatatgtcg
acctgtttaattcacaatgagcaaggtgattttgctgttcaaaaaacacgtgaaatccta
gctaaatacggaacagagccttatgatgaacaaacaggaaaaggcgatatccgccatatt
atgacaagatttgcgcatacaactggacagttaatgattgtccttgtaacaacaaaagaa
cgtatgccttttaaagaagaaattgtacgtgatttggtcgaacaactagaattaacttct
atcgttcaaaatattaacccacataaaacgaatgtgatttttggagatcgtacaaaaaca
ctttggggaaaagatattattgaagacacgattcatggtattcgttttgcaatttcggct
cgttcattttatcaagtgaatccgctccaaacagaagttttgtatcaacaagcaatcgac
gcggctgagttaacaggtgaagaaacagtgattgacgcttattgcggcattggttctatt
tccctttgtctcgcgaaaaaagccaagcatgtctatggggtagaaattgtggatcaagcg
atacaagatgctcgtgcaaatgcagaactcaatgaattagcgaatacaacttttgaaaca
gggaaagcagaagaggttattccggcgtggtacaaagctggcattgtagcagacgtctta
gttgtcgatccaccacgaaaaggctgcgatgaaaagttacttgaaactattttggcaatg
aaaccaaagaaagtagtatatgtttcttgtaatccagggacattagcccgagatatgaaa
atattaacagatggtggctatgtagcgaaaaaagtccaaccagtagatatgtttccaatg
acgacacatattgaagctgtgactgttttacatttaaattaa
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