Listeria monocytogenes EGD-e (serotype 1/2a): lmo0006
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Entry
lmo0006 CDS
T00066
Symbol
gyrB
Name
(RefSeq) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lmo
Listeria monocytogenes EGD-e (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmo03032
]
lmo0006 (gyrB)
03400 DNA repair and recombination proteins [BR:
lmo03400
]
lmo0006 (gyrB)
Enzymes [BR:
lmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
lmo0006 (gyrB)
DNA replication proteins [BR:
lmo03032
]
Prokaryotic type
DNA Topoisomerases
lmo0006 (gyrB)
DNA repair and recombination proteins [BR:
lmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
lmo0006 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TOPRIM_C
GyrB_hook
Motif
Other DBs
NCBI-GeneID:
984708
NCBI-ProteinID:
NP_463539
Pasteur:
LMO00006
UniProt:
Q8YAV7
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All DBs
Position
6030..7970
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AA seq
646 aa
AA seq
DB search
MSEENITNVQENASDYNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDE
ALAGFCTEIEITIEADNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYK
VSGGLHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDVVMDMEEQGETDYRGTIVHFT
PDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISIEDKREEHKVRKDFHYEGGIRSYVEH
LNKAKDVIHEPPIYLEGERDDIMVEISMQYNTGFSSNIISFANNIHTYEGGTHESGFKTA
LTRVINDYARRNKLFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSI
TDKLFSEALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLA
DCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIR
TIFTAMGTGFGGDFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYI
AQPPLYQIKHGKQIEYVYSDGQLEDYLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPE
HRTLLQVNIKDAIDADETFEMLMGDRVEPRRKFIEDNAQYVKNLDV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaaatattacaaatgtacaagaaaatgcttcagattataacgaagatcaa
atacaagtactggaaggcctagaggcagtaagaaaaagacccggtatgtacattggttca
actagccaacgcgggctccatcaccttgtatgggaaattgttgataatgcaattgatgaa
gcacttgctggtttttgtacagaaattgaaattacaattgaagctgataacagcattact
gttcgcgataacggacgtggaattcctacagggattaatgaaaaaatcggtcgtccaaca
gtagaagtaatctttaccgttctgcatgctggtggtaaatttggcggcggcggatataaa
gtatctggcggacttcacggagttggtgcatcggtagttaatgccctttccacatctctt
gaagtatacgttcaccgtgaaggtcaaaaatattaccaacgctttgaacgtggtgatgta
gtaatggatatggaagaacaaggcgaaacggattatcgtggaacaattgttcactttaca
ccagatccacaaattttcacagaaacaacggaattcgattttgatacgcttcgtacgcgt
acacgcgaacttgctttcttgaatcgtggtttaacgatttcaattgaagataagcgcgaa
gaacacaaagttcgtaaagatttccactatgaaggcggaattcgttcttacgtggagcat
ttaaataaagcaaaagacgttatccatgagccaccaatttatttggaaggtgaacgcgat
gatattatggttgagatttccatgcaatataatactggattctcaagcaacatcatttca
ttcgcaaataacattcatacgtatgaaggcggaactcacgaatctggctttaaaacggcg
ttaacacgtgttattaatgactacgcgcgtcgtaataaattgtttaaagatagtgatgac
aatctttctggtgaagatgttcgtgaaggtttaacggcgattatttctatcaaacaccca
gatccacagtttgaaggacaaaccaaaacaaaacttggaaattcagaagcccgttcaatc
acggataagctattttctgaggctttaaataaatttatgatggaaaacccagatgttgct
aaaaaaatcgttgagaagggcgttgtggcttctcgtgcacgtctggctgctaagcgcgcg
cgtgaagttgctcgtaaaagcagtgggctagaaatttctagcttgccaggtaaattagct
gactgttcttcccgtaatcctgaaatcagcgaactttacatcgttgagggtgactcagct
ggtggttcagctaaacaaggtcgtgaccgtttattccaagcgattttgccgattcgtggt
aaaattttgaacgtggaaaaagcacgtttagaccgtattctagctaacgaagaaattcga
actatttttacagcgatgggtactggttttggtggcgattttgacgtttctaaatctcgt
taccacaaattaattattatgactgatgccgatgttgatggtgcacatattcgtacacta
cttcttacactattttatcgttatatgcgtccactgcttgatgctggttatatctatatt
gcgcaaccaccgctttaccaaattaagcatggtaaacaaatagaatatgtatacagcgac
ggacagttagaagactatctggcttcccttgacggagacactaaatacagcattcaacga
tataaaggtcttggagaaatgaacccagaacaactttgggatacaacaatgaatccggaa
caccgtacactacttcaagtcaatatcaaagacgctattgatgccgatgaaacttttgaa
atgttgatgggtgaccgcgtggaacctcgtcgtaaattcatcgaagacaacgcgcaatac
gttaaaaacttggatgtttaa
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