Listeria monocytogenes EGD-e (serotype 1/2a): lmo0866
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Entry
lmo0866 CDS
T00066
Name
(RefSeq) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmo
Listeria monocytogenes EGD-e (serotype 1/2a)
Pathway
lmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lmo0866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmo03019
]
lmo0866
03009 Ribosome biogenesis [BR:
lmo03009
]
lmo0866
Enzymes [BR:
lmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
lmo0866
Messenger RNA biogenesis [BR:
lmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lmo0866
Ribosome biogenesis [BR:
lmo03009
]
Prokaryotic type
rRNA helicases
lmo0866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
NABP
Motif
Other DBs
NCBI-GeneID:
984613
NCBI-ProteinID:
NP_464392
Pasteur:
LMO00866
UniProt:
Q8Y8N0
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All DBs
Position
905962..907524
Genome browser
AA seq
520 aa
AA seq
DB search
MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLEGKDLIGQAQTGTGKTAAFGLPM
IHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKN
PQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQTLL
FSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAP
ELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTK
KRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAMLK
MLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGR
RSGGGSGGGSGSGGGGNRDRRGGGEQRSGGNKGNYSQKSK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaatcggatg
gggtttgaagaagcaacaccaatccaagaaaagacaattccactaggattagaaggtaaa
gacttaatcgggcaagcacaaacaggtactggtaaaacagccgcttttggtcttccaatg
attcacaaaattgaccaaaagagtaacaacgtacaagctttaattattgctccaacacgt
gaacttgcaatccaagtttcagaagagctttataaacttagctatgataaacatgtacgt
gtgctagcggtttacggtggtagtgatatcagccgtcaaatccgttcacttaagaaaaac
ccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgcacactg
aaactagatcacgtggaaacacttgtactagatgaagcagacgaaatgctaaacatgggc
ttcattgatgatatcgaaactattctaaaagaagtaccagcagaacgtcaaactttacta
ttttctgcaacaatgcctgatccaattcgccgtatcggtgaacgtttcatgcatagccca
gaacttattcgtattaaagcaaaagaaatgactgcactattaatcgaacaattcttcgta
aaagtgcatgaaaaagaaaaatttgacgtattatctcgtttattagatgttcaagcacca
gaattagcaattgtttttggtcgtacaaaacgtcgtgtagacgaactatctcgcgcgctt
gatatgcgtggttacgtggctgaaggtatccacggtgacttaacgcaagcaaaacgtatg
agcgtactacgcaaatttaaagaaggaaaaattgatgttctagttgcaacagacgtagca
gcacgtggacttgatatttccggtgtaacacatgtatataactatgatattccacaagat
ccagaaagctatgttcaccgtattggtcgtactggtcgtgctggtaaagaaggtatggcg
attacattcgtacaacctcgtgaaatgggttatttacgtattgtggaagaaactacgaaa
aaacgtatgcaaccacttcaagctcctacatgggacgaagcatttgcaggccaattacgc
gtagcaactgaaaaaattcaagaagcaattacagaagaaaacttagctgactacaaaacg
tttgctaacgaacttcttgaaaaatacgatgcaactgacatcgcagcagcaatgcttaaa
atgttagcgaaagaaccagataaaactcctgtccatattactgaagagcgtccattacca
tcccgtggtggcggtggctacaaaggtaaaaatggtaaaggcggcaaaggtggcggctat
cgcggcggaagcggcaaaggcggaagctaccgtgatcgtaacaacagcggtaaaggtcgt
cgtagcggcggcggttccggtggtggaagcggctctggcggtggcggcaatcgtgatcgt
cgtggcggcggagaacaacgcagcggcggcaacaaaggcaactactcacaaaaatctaaa
taa
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