Listeria monocytogenes EGD-e (serotype 1/2a): lmo1027
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Entry
lmo1027 CDS
T00066
Name
(RefSeq) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lmo
Listeria monocytogenes EGD-e (serotype 1/2a)
Pathway
lmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lmo1027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmo03019
]
lmo1027
Messenger RNA biogenesis [BR:
lmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
lmo1027
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-GeneID:
986344
NCBI-ProteinID:
NP_464552
Pasteur:
LMO01027
UniProt:
Q92CZ5
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Position
complement(1055393..1057060)
Genome browser
AA seq
555 aa
AA seq
DB search
MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL
VKNKDKIKGLFITHGHEDHIGGVPYLLRDLNIPIYAGKLASALIRNKLEEHGLLRQTKIY
EYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRDVEGRIIFATFASNIYRLQQ
VVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTGS
QGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGKV
NNIHTSGHGGQQEQKLMLRLMKPKFFMPIHGEFRMQKIHAESAEECGVPEENSFIMANGD
VLALTSETAHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRV
MAGPDIISRGFIYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttaaaaataatgagacagctgttttcgctcttggtggactaggcgaaatc
ggtaaaaacacatatggcgtacaatttcaagatgaaattattctaattgatgcaggaatc
aagttcccagaagacgaacttttaggtattgattatgttattcctgactacagttacctg
gttaaaaacaaagataagattaaaggactttttatcacccacggtcatgaagatcatatc
ggtggcgttccttacctacttcgcgatcttaatatcccaatttacgctgggaaacttgcg
agtgcacttatccgcaacaaattagaagaacatggcttgcttcgtcaaaccaaaatttat
gaatatgaagaagatgacgtttttaaattcagaaaaacaagtatctctttcttccgtaca
acccatagtattcctgatacgtatggtattgttgtcaaaactccatctggtaacatcgtt
catactggtgacttcaagtttgattttactccagttggcgaaccagcaaacctaacaaaa
atggctgaaatcggtaaagaaggcgttctttgtttactatctgatagtacaaatgcggaa
gtaccaaatttcaccatgagtgagcgtgtcgttggcgaaagtattaaaaatattttccgc
gatgtagaaggacgaattattttcgctaccttcgcatctaatatctaccgtttacaacaa
gtagtggaatcctctatcgaaactggtcgtaaaatcgctgtttttggtcgtagtatggaa
tctgctatggaaatcggtaaacaattaggctatattcaagcgccaaaagacacatttatt
gatgtgcatcaacttaataaaacacccgctggaaatgtgactatcctttgtacagggagt
caaggtgaaccaatggctgctctttctagaattgctaacggtacgcaccgtcaaatccaa
attcaaccaggtgacacggtagtcttctcgtcttccccaatccctggtaatacaacgagt
gtaaaccgaacaatcaatttactttatcaagctggtgcagaagttatccatggtaaagta
aacaatatccatacttctggtcacggtggtcaacaagaacaaaaactaatgctacgtttg
atgaaacctaaattctttatgccgattcatggtgaattcagaatgcaaaaaattcatgca
gagtctgctgaagaatgtggtgttccggaagaaaatagctttattatggcaaacggagat
gtactcgcattaacgagtgaaacagctcatgttgctggtaaaatccatgcagcaagcgtc
tatattgatggtagcggtattggcgatatcggtaatattgtccttcgcgatcgtcgtatt
ctttctgaagaaggcctcgtaatcgttgttgtatccattgatatgaaaaattctcgtgtg
atggcaggacctgatattatttcacgtggcttcatttatatgcgtgaatccggtaatctc
atcggagaagcgcaaggcctcctaacgcgacacttaaacaaagtaatggaacaaaaaaca
acgcaatggtctgaaatcaaaaatgaaattacagatactttgcaacctttcttgtacgaa
aaaacaaaacgtcgtccaatgattttaccaataatcatggaagtatag
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