Listeria monocytogenes EGD-e (serotype 1/2a): lmo1275
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Entry
lmo1275 CDS
T00066
Symbol
topA
Name
(RefSeq) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lmo
Listeria monocytogenes EGD-e (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmo03032
]
lmo1275 (topA)
03400 DNA repair and recombination proteins [BR:
lmo03400
]
lmo1275 (topA)
Enzymes [BR:
lmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
lmo1275 (topA)
DNA replication proteins [BR:
lmo03032
]
Prokaryotic type
DNA Topoisomerases
lmo1275 (topA)
DNA repair and recombination proteins [BR:
lmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
lmo1275 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
JHBP
DUF2996
Lar_restr_allev
Toprim_2
Toprim_3
HypA
Motif
Other DBs
NCBI-GeneID:
985095
NCBI-ProteinID:
NP_464800
Pasteur:
LMO01275
UniProt:
Q8Y7K2
LinkDB
All DBs
Position
1297823..1299901
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTENDYEPRYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLELDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKKKLSTADDVKEVMSAIKGKSFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEASNYIKETYGPEFSRNHKRSDKNAKGAQDAHEAIRPTSAMRSPQEVK
EYLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFIPTELGEIVNEMIEEYFPEILDVKFTANMESELDEVEHGE
VEWVKVIDEFYKRFEPNVIKADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERAC
PKCEKRALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacgattgagaagtat
ttaggcaagaaatttaaagttaaagcttccatgggacatgttcgtgacttaccgaagagt
caaatgggtgtagacacagaaaatgactatgaacctcgttatattacgattcgcggaaaa
ggccctgttttaaaagaattaaaacaagctgccaaaaaagcgaaaaaagtctatctcgca
gccgatccagatcgtgaaggggaagcaattgcatggcacttagctaacagtttagagtta
gatcaatcagacaaattacgtgtagtatttaacgaaataacgaaagaagcagtaaaagaa
tctttcaaaacaccacgtaaaattgacatggatttagtcaatgcacagcaagcgcgtaga
attttagaccgtttagttggatataatatcagccctatcctatggaaaaaagtgaaaaaa
ggtttgagtgctggtcgtgttcaatctattgcacttcgaatcattattgatagagagaaa
gaaatcaataatttcaaacccgaagaatactggacaattgacggtaacttccttaaaggt
aagaaaaaattccaagccaatttttatggtgtaaatggcaaaaagaaaaaactttctact
gcggatgatgtaaaagaagtaatgtctgcaatcaaagggaaatcatttgacgtaacagat
gtaacaaaaaaagaacgacttagaaaccctgctgcaccatttaccacctcaagtttgcaa
caagaagcagcacggaaactaaattaccgtacaagaaaaacgatgatgcttgctcaacaa
ttatatgaagggatcacacttggcaaacaaggcacagtcggcttaatcacttatatgcgt
accgactccactcgtattgcagattccgctatactagaagcaagtaactacattaaagaa
acttatggacctgaattttctcgtaatcataaacgatcagataaaaacgcaaaaggtgct
caagatgcccatgaagcaatcagacctacaagtgcaatgagaagtcctcaagaagtaaaa
gaatatttaactcgtgaccaacttcgcttatatcggctgatttgggaaagattcattgct
agccaaatgacaccagcagttcttgatacaatgcgcgttgacttagataacaatggcgtg
aatttcagagcgaatggctcgaaaattaaattccacggctttatgaaagtctatgtagaa
agtaacgatgataatacggaagaaaaagaaaatattctaccggatttgaaaaaaggagat
aaggtgcagtccgaatcactcgaacagcggcaacatttcacgcagccacctccacgttat
accgaagctagattagtaaagacgctagaagaaattggtattggccgtccttcgacttat
tcgccaacgcttgatacaattcaacgcagaaattatgtttccttaacaaataaacgattt
atcccaactgaattaggtgaaatagtcaatgaaatgattgaagagtatttcccagagatt
ttagatgtgaagttcaccgccaacatggaaagtgagctagatgaagtagagcacggagaa
gtcgaatgggtgaaagtcattgatgaattttataaacgatttgagccaaatgtcattaaa
gcagatgctgaaatggaaaaaatcgagattaaagatgaaccagctggcattgactgcgac
ctttgcggagccccaatggtatacaaaatgggtaaatatggtaagtttcttgcttgcagt
agatttccggattgtcggaatacaaaagcaatcgttaaagaaatcggtgttacttgtcca
aaatgtgagaaaggacatgtaatagaaagaaaaagtaagaaaaaacgtattttctacggt
tgtgatcgttatccagattgtgactatgtatcttgggataaaccagtcgaacgtgcttgt
ccgaaatgtgagaaacgagcactagtcgagaagaaattgaaaaaaggtgtacaagtacaa
tgtacaaattgtgattacaaagaatcaacccaacaataa
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