Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_0885
Help
Entry
LMOATCC19117_0885 CDS
T02239
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmoa
Listeria monocytogenes ATCC 19117 (serotype 4d)
Pathway
lmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOATCC19117_0885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmoa03019
]
LMOATCC19117_0885
03009 Ribosome biogenesis [BR:
lmoa03009
]
LMOATCC19117_0885
Enzymes [BR:
lmoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMOATCC19117_0885
Messenger RNA biogenesis [BR:
lmoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMOATCC19117_0885
Ribosome biogenesis [BR:
lmoa03009
]
Prokaryotic type
rRNA helicases
LMOATCC19117_0885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
NABP
Motif
Other DBs
NCBI-ProteinID:
CBY69784
LinkDB
All DBs
Position
919737..921296
Genome browser
AA seq
519 aa
AA seq
DB search
MTLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGL
PMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLK
KNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQT
LLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQ
APELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATD
VAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEET
TKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAM
LKMLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGK
GRRSGGGSGSGGGGNRDRRSGGGEQRSGGNKGNYSQKSK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacattgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaat
cggatggggtttgaagaagcaacaccaatccaagaaaagacaattccactaggactagca
ggtaaagacttaatcgggcaagcacaaacaggtactggtaaaacagccgcttttggtctt
ccaatgattcacaaaattgaccaaaagagtaacaacgtacaagctttaattattgctcca
acacgtgaacttgcaatccaagtttctgaagagctttataaacttagctatgacaaacat
gtacgtgtgctagcggtttacggtggtagcgatatcagccgtcaaatccgttcacttaag
aaaaacccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgc
acactgaaactagaccacgtggaaacacttgtactagatgaagcagacgaaatgctaaac
atgggcttcattgatgatatcgaaactattctaaaagaagtaccagcagaacgtcaaact
ttactattttctgcaacaatgcctgatccaattcgccgtatcggtgaacgtttcatgcat
agcccagaacttattcgcattaaagcgaaagaaatgactgcactattaattgaacaattc
ttcgtaaaagtgcatgaaaaagaaaaatttgacgtattatctcgtttattagacgttcaa
gcaccggaactagctattgttttcggtcgtacgaaacgtcgtgtagacgaactatctcgc
gcgcttgatatgcgtggttacgtggctgaaggtatccacggtgacttgacgcaagcaaaa
cgtatgagtgtactacgcaaatttaaagaaggaaaaattgatgttctagttgcaacagac
gtagcagctcgtggacttgatatttccggcgtaacacatgtatataactatgatattcca
caagatccagaaagctatgttcaccgtatcggtcgtactggtcgtgctggtaaagaaggt
atggcgattactttcgtacaacctcgtgaaatgggttatttacgtattgtggaagaaact
acgaaaaaacgtatgcaaccacttcaagctcctacttgggacgaagcatttgcaggccaa
ttacgcgtagcaactgaaaaaattcaagaagcaatcacagaagaaaacttagctgactac
aaaacgtttgctaacgaacttcttgaaaaatacgatgcaactgacatcgcagcagcaatg
cttaaaatgttagcgaaagagccagacaaaactcctgtccatattactgaagagcgtcca
ttaccatcccgtggtggcggtggctacaaaggtaaaaatggtaaaggcggcaaaggtggc
ggctatcgcggcggaagcggcaaaggcggaagctaccgcgatcgtaacaacagcggcaaa
ggtcgtcgtagcggcggcggaagcggttctggcggtggtggcaatcgtgatcgtcgtagt
ggcggcggagaacaacgcagcggcggcaacaaaggcaactactcacaaaaatctaaataa
DBGET
integrated database retrieval system
