Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_1534
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Entry
LMOATCC19117_1534 CDS
T02239
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmoa
Listeria monocytogenes ATCC 19117 (serotype 4d)
Pathway
lmoa03410
Base excision repair
lmoa03430
Mismatch repair
lmoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMOATCC19117_1534 (recJ)
03430 Mismatch repair
LMOATCC19117_1534 (recJ)
03440 Homologous recombination
LMOATCC19117_1534 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmoa03400
]
LMOATCC19117_1534 (recJ)
DNA repair and recombination proteins [BR:
lmoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LMOATCC19117_1534 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LMOATCC19117_1534 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LMOATCC19117_1534 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CBY70433
LinkDB
All DBs
Position
complement(1551087..1553438)
Genome browser
AA seq
783 aa
AA seq
DB search
MIHSKYLWNIEGAAEDKASQLAEQLKISLPLAKLLWKRKITTQGQFDKFFHPEKYESYDP
FLFAEMDLAVARIKRAIELNEQILVYGDYDADGVTSIAVLMKTLRHLGANAEFYIPNRFT
EGYGPNITAFDMAKNQGTDLIITVDNGIAALEVMTHAKEIGLDVIVTDHHEPREVMPEAV
AVIHPKHPKSAYPFDELAGVGVAYKLSHALLGEEPKELLDLVAVGTVADLVSLTDENRLL
VQLGLRQLRESANLGLSVLAKKASLKLEEATEETIGFGLAPRLNAVGRLGPADPAADLLL
TEDPEEALFLAEEIDDANKERKQIVVDTTKLAMEAIEAKETLGNVLVVYGEGWNTGILGI
VASKLVGTYSRPAIVLGIDPVTGIAKGSGRSVDAFHLYQALDKHRDLMTAFGGHPMAAGL
TLPAENLTELEAKLQEEASFLSEEDFRPALKIEEKINIADVSVAFIAQLEKLAPFGMDNP
KPIFLLENMHLKGTKRIGADKTHLKTMLATEENDATLDSIGFGVGDLVEKISPNAAVDVV
GELSINEWNNVKKPQLRMMDIHISHWQLFDVRNKSEWARILQEQTESRVFVCFEERTIGT
LGEKNYILVDEKADFTADFQTEELVFADMPTKTELVETIVRETKPERIFVHFDAAEGNQI
PAIPDRLAFAELYSLIKKFQPFPIEKYTPRLMQKFGWNKEQIDFMSKVFFDLEFAKMESG
QIIINEVVEKRNLDESLVYQQKVEEITTRKKLLYSNYTELHSWMESMMETSIYPNAEELE
NGN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgattcattcaaaatacttatggaatatcgagggagcggcggaagacaaagcaagccaa
ttagcagaacagctaaaaatttcgcttccacttgcaaaactactttggaaaagaaaaatt
acaacgcaaggacaattcgataaatttttccacccagaaaaatatgaaagctatgaccca
tttttatttgctgaaatggatcttgcggttgctagaattaagcgagcgatagaactaaat
gagcagattttagtttacggagattatgatgcagatggagttactagtattgccgtttta
atgaaaacactgcggcatttaggagcaaatgctgaattttatattcctaatcgttttacg
gaaggttatggtccaaatatcactgcttttgatatggctaaaaaccaaggaacggattta
attattacggttgataatggtattgcggcgcttgaagtaatgacgcatgccaaagagatt
ggtttagatgttattgtgacggatcaccatgaaccacgggaagttatgccggaagctgtt
gcagtaattcatccgaagcatcctaagtcagcttatccttttgatgaattagcgggtgtg
ggtgttgcttataagttatcgcatgcattacttggagaagaaccgaaagaattgcttgat
ttagttgcagttggaacggtggcagatttagtttctttaacagatgaaaatcgcttactt
gtccaacttggattgcgccaattgcgcgaatccgcgaaccttggactttcagtgttagct
aaaaaagctagtttgaagttagaagaggctacggaagaaactattggctttggtttagct
ccacgactgaatgctgttggtcgtttaggcccagcagatccagcggcggatttactttta
acagaggatccagaagaagcacttttcttagcagaagaaattgatgatgcgaataaagaa
cgtaaacaaatagttgttgatacaacgaagctcgcgatggaggcaattgaggcaaaagaa
acattaggaaatgtgctcgttgtttacggagagggttggaatacagggattttagggata
gttgcttctaaattagttggaacatattctcgtccggcgattgtactaggaattgatcca
gttactggaattgccaaaggatctggtcgaagcgtcgatgcatttcatttgtatcaagcg
cttgataaacatcgtgatttaatgactgcatttggtgggcatccaatggctgcgggtctt
acattgcccgctgaaaatctaacagaattagaagctaaattacaagaagaagcgagtttt
ctttctgaagaagatttccgcccagccttgaaaatagaagagaaaataaatattgcggat
gtttccgtagcatttattgctcaacttgaaaaattagctccttttggaatggataaccct
aaaccaattttcttgttagaaaatatgcatttaaaaggaacgaaaagaattggggcagat
aaaacccatttaaaaacaatgcttgctacagaggaaaatgatgccactttagattctatc
ggatttggtgtaggcgatttggtagaaaaaatttctccaaatgcagccgtggacgtggtt
ggggaattatccatcaatgaatggaataatgtgaaaaaaccacaactacgcatgatggac
attcacatctcgcattggcaacttttcgatgtacgtaataaatctgagtgggctaggatt
ctccaagaacaaacagaatcaagagtttttgtttgttttgaagaaagaacgattggcacg
cttggagaaaaaaactatattttagtggatgaaaaagctgattttacggcggatttccag
acagaagaacttgtttttgcggatatgccaacgaagactgaattagtggaaacgattgtt
cgtgaaacgaaaccagagcgtatttttgtccattttgatgcagcagaggggaatcaaatt
ccagcaattccagaccggttagcctttgctgagctatatagtctcatcaaaaaattccaa
ccatttccaattgaaaagtacacaccacggctaatgcaaaagtttggctggaataaagag
caaatagatttcatgtcaaaggtgttttttgatttagaatttgctaaaatggaaagtggt
cagattattattaatgaagttgttgaaaaacgtaatctggacgaatcacttgtttatcaa
caaaaggtagaagaaataactacaagaaaaaaactgttgtactctaactatacggaactt
catagttggatggaatcaatgatggaaacatcaatttacccgaatgcggaggaactagaa
aatggaaattaa
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