Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_1585
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Entry
LMOATCC19117_1585 CDS
T02239
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmoa
Listeria monocytogenes ATCC 19117 (serotype 4d)
Pathway
lmoa03030
DNA replication
lmoa03430
Mismatch repair
lmoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMOATCC19117_1585 (dnaE)
03430 Mismatch repair
LMOATCC19117_1585 (dnaE)
03440 Homologous recombination
LMOATCC19117_1585 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmoa03032
]
LMOATCC19117_1585 (dnaE)
03400 DNA repair and recombination proteins [BR:
lmoa03400
]
LMOATCC19117_1585 (dnaE)
Enzymes [BR:
lmoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMOATCC19117_1585 (dnaE)
DNA replication proteins [BR:
lmoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMOATCC19117_1585 (dnaE)
DNA repair and recombination proteins [BR:
lmoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMOATCC19117_1585 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
CBY70484
LinkDB
All DBs
Position
complement(1605505..1608831)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAESTAGYHELLKIASAIQTREEGPELPQSWLRAYSS
NLIAISPGAKGEIERLLMEENREGALEVYANLVEIFGKESVYLSAQKENPRLFTKIETFS
AEENVPVVATKNVQYIEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQEEMERDWQ
TEFEKRACLETGELADRCHVEIALDQHLLPRFPLNEGQNASDVLRQTAFAGLKERNLLGV
EYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGILTGPGRGSAAGALVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLAPILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSRGYSDASANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISM
LAPSINHSNYYFQVENESSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAA
YVHEVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADTRN
GELQLIINKAEDLKEIKAPVRLFLKLTEPQQMEQIKPVLTRYKGDSKVIVHQAITKQTAE
LKNIQVTPSNELQEALEELLGKENVVIK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtggggtttgttcatttacaagttgcgagcgcttatgatttgctttcaagtacagcatcg
attgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtactttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattatcgggatgacggtgacaattcaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcacgagttattaaaaatcgcgagtgct
attcaaacgcgcgaagaaggccccgaattgccacaaagctggttacgcgcttatagcagt
aacttgattgcgatttcacctggtgccaaaggagaaatcgaacgtcttctgatggaggag
aatcgcgagggagcactggaagtttatgcaaatttagtcgaaatttttggtaaagaatct
gtttatttatctgcccaaaaagaaaatccacgtcttttcacaaaaatagaaactttttct
gcagaagaaaatgtaccggttgttgcgacgaaaaatgtacaatatatagaaccaaaagat
gcgcaagcaaaagaagttttaacggccattcgtgataatcgaacggtcgattggacaacg
ttaccacttgccggaccaaattattttacctcacaagaagaaatggaacgtgattggcaa
acggagttcgaaaaacgggcatgcttagaaactggtgaacttgcagatcgttgtcatgtc
gaaattgctttggatcagcatttattacctagatttccattaaatgaaggacaaaatgca
tcagatgttttgcgtcaaacagcctttgcaggattaaaagaacgaaatttattaggtgtg
gaatatcaggagcgtttagaatatgaattaaaagtcattacggaaatgggttttgcagat
tactttctaatcgtttgggatgttattcgttattcacgcgaggcgggaattttaacaggt
ccaggtcggggctctgcggcgggggcgcttgtttcctatgcactcagaattacggatgta
gacccgattcgttacaatttgctatttgaacgatttttaaacccagaacgtatcacgatg
cccgatattgatttggattttccagataatcgccgcgatgaagtgatttcgtatgtggta
tctaaatacggagaagcgcatgtggcgcaaatcggcacgtttggaacactagcggcaaaa
gcggcgattcgcgatactgcgaggagttttgggctaaattctgtactattatctgaatgg
tctaagttgattccaagtcagttaggtattacgttacaaaaagcactacaagaaagtccg
cgtttagaaaaccatattaaaagctctaaagaaaatgaaatgatttgggaagttgcttgt
caactggaaggcttgccacgtcatatttcaacgcacgcagccggaatagtaattagtgac
aagccactcgtagaacaagtcgcgctacaattaggtagcggagatgcacgtttgacccag
tttgctatgggagaattagagaaaatcggcttacttaaaatggactttttaggacttaga
aatcttagtttacttgatcgtgttttgaaatcagtcaattatactagagaaactccgtta
acattagcagatatttccttagaagataaaaaaacattgaaactattccaaacaggtgac
acgacaggggtattccaatttgaatcggacgggattcgacgcgtgctccgaaaattaaaa
ccaacttcttttgaagatgtcgtggcggtagatgcgctttatcgtccgggtccaatggaa
caaattgatacatttatcgctagaaaacacggaaaagaaaaaattcaatatcctcatcca
gatttagcgcctattttggaagtgacatacggcgttatcgtttatcaagagcaaattatt
caagtagcgaaccaaatggctggattttcgcttggagaagcagatttattaagacgagcg
gtcagcaagaaaaaagcagatgtcctaaacgaagagcgaattcactttgtggaaggtgct
aagagtagaggttattcagatgctagcgctaaccaagtgtatgatatgattgttcaattc
gcgaattacggtttcaaccgaagtcacgctgcagcatattcaaaaatcgcttttcaatta
gcttatttaaaagcacattttccagctgcatttatgtcgtcgcttcttagctctgttttt
ggcaatgacgacaaaatttcccagtacattaccgaagcaaaaaactacggaattagcatg
ttagcgccaagcatcaaccatagtaattactacttccaagtggagaatgaatcatctatc
cgctatagtttccgtgttattcgtaaagtgccaacgaaattcattttagaaattattaac
gaacgaaaaaaagcacctttccgagatttctttgatttttgtgaaagaatgccacataaa
atgctctcagaaaccgttttagaagcacttgtattttctgggtgttttgacgaatttggc
gaggatcgagcaacgattttggcaaccattgatgcagtgctacaatatatttcgctactc
ggtgaagattcgaaaggaatgaatcttttcgcggaagatgatgactttttgaaaaagatg
aaaccacgctaccggaaaaccgcgcccatttcgattgatgaaaagctggagaaagaaaaa
ttatacacgggtcaatacgtttcagcgcatccagtatcgtactaccaaaataaattacaa
aatcttgctattacaagacttgcaaatctttcttccggcaaaaactatcaagtagctgct
tatgtacatgaagtcaaatcaattagaacaaaaaagggcgaaacgatgtgctttttaaca
attagtgatgattcaaaagaactgagcgccgtcatgttcccggaaagttatcgtaaattc
gcgagctttgcacaaaaaggggagattctctttttgcaagtcaaagcagacacaaggaac
ggagagctacagttaattatcaataaagcagaagatttaaaagaaataaaagcccccgta
cgattgttcctaaaattaacggaaccacagcaaatggaacaaattaagccagttttaact
cgttataaaggcgacagtaaggtcattgtgcatcaagcaataacgaaacaaactgctgag
ctgaaaaatattcaagtaacgccatcaaatgagctgcaagaagcgttagaagagctactc
ggtaaagagaatgtagtcattaagtaa
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