Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_2245
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Entry
LMOATCC19117_2245 CDS
T02239
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lmoa
Listeria monocytogenes ATCC 19117 (serotype 4d)
Brite
KEGG Orthology (KO) [BR:
lmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmoa03019
]
LMOATCC19117_2245
Messenger RNA biogenesis [BR:
lmoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMOATCC19117_2245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CBY71144
LinkDB
All DBs
Position
complement(2315317..2316303)
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AA seq
328 aa
AA seq
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MGEETSYYRKKEGDTMEKRLLDFEVGETVDLFLLIKSSVKGTASNGKPFLSLVLQDKSGE
LEAKLWDVKESDEANYGVQQIVHLMGDIQNYRGRKQLKIRQIRQATALDGVSASEFMETA
PINKEEMADEITQYIFEMKNANLQRITRALLKKYQDDFYDYPAAMRHHHEFVSGLSFHVV
SMLRLAKSVADLYPSVNRDLLYAGVILHDLGKVIELSGPVSTTYTLEGNLIGHISIVVEE
VSKIADELSIDGEEVVVLKHVLLSHHGKGEWGSPKPPLVREAEILHQIDLMDASLNMMDK
VLKHTKPGEFSERVFGLDNRSFYNPIFE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagaaacttcttactacagaaagaaagaaggcgatacaatggaaaaaagatta
ttagattttgaagttggagaaacagtagacctattcttgctaattaaatcaagtgtaaaa
gggacggctagcaacggaaagccattcttgagtcttgttttacaagataaatcaggtgaa
ttagaagcaaaactatgggatgttaaagaaagtgatgaagcgaattacggggtacaacaa
atagttcatcttatgggtgatattcaaaattatcgtgggcgaaaacaattgaaaatccgc
caaattagacaagctacagcactggacggtgttagtgctagtgaattcatggaaaccgcg
ccaattaataaagaagaaatggctgatgaaatcacacaatatattttcgaaatgaaaaat
gcgaatttgcaacgaattacgcgcgcattgcttaaaaaatatcaagatgatttttatgat
tatccggcggcaatgcgtcatcatcatgaatttgtttccggcttgagttttcatgtagtt
tcgatgttacgacttgcaaaatcagttgccgatctttacccatctgttaaccgagattta
ttatacgcaggtgtgattttacatgatttaggaaaagtcattgagctttcaggccctgta
tcaacgacgtatacactagaaggtaatttaattggccatatttctatcgtagtagaagaa
gtgagtaaaattgcggacgaactttcgattgatggtgaagaggtcgtggttttaaaacat
gttcttctttctcatcacggcaaaggtgaatggggtagtccaaaaccaccacttgtgcgt
gaagcagagattttacaccaaattgatttaatggatgcttccttgaacatgatggataaa
gtactaaaacatacaaaacctggtgaattcagtgaacgagtatttgggttagataatcgt
tcgttttacaatcctatatttgaataa
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