Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_2497
Help
Entry
LMOATCC19117_2497 CDS
T02239
Symbol
uvrA
Name
(GenBank) excinuclease ABC, subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lmoa
Listeria monocytogenes ATCC 19117 (serotype 4d)
Pathway
lmoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMOATCC19117_2497 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmoa03400
]
LMOATCC19117_2497 (uvrA)
DNA repair and recombination proteins [BR:
lmoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMOATCC19117_2497 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMOATCC19117_2497 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
DnaJ_CXXCXGXG
nSTAND1
RsgA_GTPase
AAA_29
AAA_21
AAA_22
Viral_helicase1
NACHT
DUF2972
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
CBY71396
LinkDB
All DBs
Position
complement(2577844..2580624)
Genome browser
AA seq
926 aa
AA seq
DB search
MTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDLIEGLSPAISIDQK
TTSRNPRSTVGTVTEIHDYLRLLYARVGHPVCPNHGIEITSQTIEQMVDRVLEYPEKTRI
QIMAPIVSGKKGTHKKTIEEIKKEGYVRIRVDGEIYDINDEIEIEKNKKHSIEIIIDRIV
IKEGINTRLYDSIEAALRLADGYAVVDIMGDKELLFSEHYACPYCGFSVGELEPRMFSFN
SPFGACPTCDGLGTKLEVDVDTVIPDRSLSLNEGAIIPWRPISSQYYPQMLASACKEFGI
DMDTPLEKLTKEELDIILNGSKDKEFYFEYKNDFGMTRETWIPFEGILPNIERRYRETNS
DFTRDQMAQYMTDLPCPSCKGYRLKEETLSVKVNNHHIGQISEFSINEALDFFDGLELSE
KETQIAAPIFKEVRARLGFLKNVGLDYLTMSRAAGTLSGGEAQRIRLATQIGSRLTGVLY
ILDEPSIGLHQRDNDRLISTLQSMRDIGNTLIVVEHDEDTMMAADYLIDIGPGAGEHGGR
IVAAGTPEEVAKNKNSITGDYLSGKKFIPVPAKRRKGNGLELEIIGAKANNLKNVNAKIP
LATFSCVTGVSGSGKSSLVNEVLRKALARKLNRNHAKPGEHKEIKGIENLEKIINIDQSP
IGRTPRSNPATYTGAFDDIRDLFASTNEAKVRGYKKGRFSFNVKGGRCEACKGDGIIKIE
MHFLPDVYVPCEVCHGKRYNGETLDIRYKGKNIAEVLEMTVEEGLEYFTNQPRIARKLQT
IVDVGLGYIRLGQPATTLSGGEAQRVKLASELHKRSNGKSFYILDEPTTGLHADDIGRLL
KVLQRLVEENGDTVLVIEHNLDVIKQADYLIDLGPEGGDGGGQIIATGTPEKIARSKKSY
TGKYLKPILERDKERTEERITTAKKK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgactggactttcaggttcaggtaaatcttcgcttgcttttgatacgatttacgcagaa
ggacaaagacgttatgtagagtctttgtccgcatatgcgcgccaatttttaggccaaatg
gataaaccagatgtagatttaattgaaggattaagccctgccatttcgattgatcaaaaa
acaacaagccgtaatccacgttcaactgttggtactgtcacagaaatccatgactatttg
cgcttactttatgctcgtgttgggcatccagtttgtccaaatcacggtattgaaatcact
tcccaaacaatcgaacaaatggtggatcgcgttctagaatatccagaaaaaacacgtatt
caaataatggctccaatcgtttctggtaaaaaaggaacccataagaaaactattgaggaa
ataaaaaaagaaggctatgttcgaattcgtgttgatggagaaatttatgatatcaatgac
gaaattgaaatcgagaagaataaaaagcattctattgaaatcattattgatcgcattgtg
attaaagaaggtatcaatactcgtttgtatgactccattgaagcggctcttcgtttagct
gatggttatgcggttgttgatataatgggcgataaagaattattatttagtgaacactat
gcgtgcccttattgtgggttttccgttggtgaattagaaccaagaatgttctctttcaat
agcccatttggcgcttgtccaacatgtgatggacttggcactaaacttgaagtcgatgtc
gacacagttattccagatagaagtctgtctctaaatgaaggtgctattattccttggcgc
ccaattagctcgcaatactatccacaaatgctagcttcggcttgtaaagagttcggaata
gatatggatacacctttggagaaactaacgaaagaagaattagatattattttaaatgga
tcaaaagacaaagaattctacttcgaatacaaaaatgatttcggaatgacacgcgaaacg
tggattccttttgaagggatacttccaaatatcgaacgccgctatcgtgagacaaattcc
gactttacgcgtgatcaaatggcgcaatatatgactgatttaccatgtccatcttgtaaa
ggttatcgtctaaaagaagaaacactttctgttaaagtaaacaatcatcatattggccaa
atcagtgagttttctattaatgaagcactagatttctttgatggcttagaactctctgaa
aaagaaacacaaattgcagcgccgattttcaaagaagttcgtgctagactaggcttctta
aaaaatgttgggctcgactatctaacaatgagccgtgcagctgggacgctatctggtggt
gaggcgcagcgaattagacttgctacacaaatcggttccagacttactggggtactttat
attctagatgaaccttccatcggtcttcatcaacgagataatgaccgtttaatcagcaca
ctccaaagtatgcgtgacattggaaacacgcttattgtcgttgagcatgacgaagatacg
atgatggccgcagattatcttattgatattggtccaggtgcaggggaacacggtggacga
attgttgcagccggaactccagaagaagttgccaaaaataaaaattccatcactggtgac
tatctttcaggtaaaaaatttattccagttcctgctaaacgtagaaaaggtaacggacta
gaattagaaattattggtgctaaagcaaataatctcaaaaacgtaaatgcaaaaattcca
ctagctactttttcttgtgtaactggagtttcaggttcaggtaaaagttcgctagtgaat
gaagtattacgaaaagcattagcgagaaaactaaatagaaaccacgcaaaaccaggtgaa
cataaagaaataaaaggtatcgaaaacctagaaaaaatcatcaatatagatcaatcacca
atcggaagaacaccgagatcgaatccagctacttatacaggggctttcgatgatattcgt
gacctttttgcaagcacaaatgaagccaaagttcgcggttataaaaaaggtcgctttagt
tttaacgtaaaaggtggacgttgtgaggcgtgtaaaggcgacggaatcatcaaaattgaa
atgcatttcttgcccgatgtatatgtaccctgtgaagtttgtcatggaaaacgatacaat
ggcgaaacgttagatattcgttacaaaggcaaaaatattgctgaagtattagagatgact
gtagaagaaggtctagaatatttcactaaccaaccgagaattgcacgtaaactgcaaacg
attgtggatgttggacttggttatattcgacttgggcaacctgctacgactctttctggt
ggtgaagcacagcgtgttaagctagcttcggaacttcacaagcgtagtaacggaaaatct
ttctatattctggatgaaccaacgaccgggctccacgcagatgatattggtcgtttactc
aaagtattacaaagacttgtagaagaaaatggcgacacagtacttgttattgagcataac
cttgacgtaattaaacaagcggattacttgattgatttaggaccagaaggcggcgatggt
ggcggtcaaattattgcaaccggcacacctgaaaaaatcgctcgctcgaaaaaatcatat
acaggtaaatacttgaaaccaattttagaacgcgataaagaacgcacagaagaacgaatc
acaacagccaagaaaaaataa
DBGET
integrated database retrieval system
