Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_2560
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Entry
LMOATCC19117_2560 CDS
T02239
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
lmoa
Listeria monocytogenes ATCC 19117 (serotype 4d)
Pathway
lmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOATCC19117_2560 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmoa03021
]
LMOATCC19117_2560 (rho)
03019 Messenger RNA biogenesis [BR:
lmoa03019
]
LMOATCC19117_2560 (rho)
Transcription machinery [BR:
lmoa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LMOATCC19117_2560 (rho)
Messenger RNA biogenesis [BR:
lmoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMOATCC19117_2560 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
S1CSD-TOTE-2
OB_RNB
NACHT
AAA
AAA_22
AAA_25
NB-ARC
Mor
Motif
Other DBs
NCBI-ProteinID:
CBY71459
LinkDB
All DBs
Position
complement(2640708..2641979)
Genome browser
AA seq
423 aa
AA seq
DB search
MAKLSIAHLESLTIKEIYALAKEHKITYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEI
IPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDKVSGKVRPPKENERYFGLLHVEA
VNGENPEVAKERVHFPGLTPLYPDRQIHLETGKNPISTRTIDLISPIGFGQRGLIVAPPK
AGKTVLLKEIANAITTNHPESELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIK
VAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMR
RSGTRKEELLLSKERLEQLWKIRKAMPKQSDGLDISERFVRYLKKTENNEAFYELLQEEM
FKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctaaactgtccattgcacacttagaaagtttaacaatcaaagagatatatgcctta
gcaaaagaacacaaaattacttactatagtaaattaacaaaacgagaattgatttttgct
ttattaaaatcaaacgcagaaaaagaaggatttttcttcatggaaggtgtattagaaatt
attccaaatgaaggttttggcttcttacgccctatcaactattcatctagttcggaagat
atttacatctctgcttcccaaattagacgtttcgagttaagaactggggataaggtttct
ggaaaagttcgtcctccgaaagaaaatgaacgttactttggcttactccatgttgaggct
gtcaatggagaaaatcctgaagtggctaaagaaagagtgcatttcccaggactaacaccg
ctttatccagatcgtcaaattcatttagaaacaggcaaaaatcctatttccacaagaacg
attgatttgatttcaccaattggttttggtcaacgcggacttattgtagctccaccaaaa
gcaggtaaaacggtattacttaaagaaattgcgaacgcgattactactaatcatccagag
tcagaattgattgtcttgttaattgatgagcgtccggaagaagtaactgatatcgaacgt
tctgtaaaggccgatgttgtcagttccacatttgatgaggtacctgaaaatcacattaaa
gtagcagaactggttcttgaacgagcgatgcgtttagtagaacaaaaacgcgatgtggtc
attttaatggatagtattacgcgacttgcgagggcctataacctagtgattccgccaagt
ggtcgaacactttcaggggggattgatcctgctgcattccatagaccgaagcgcttcttt
ggagctgctcgtaatattgaagagggtggaagcttaaccattcttgccacagcattagtt
gacacgggttctcgaatggacgatgttatttacgaagaattcaaagggacaggcaacatg
gagttacatcttgatcgccaacttgcagaacgtcgcgtttttcctgctatcgatatgcgt
cgctccggcacaagaaaagaagaattactactatccaaagagcgtcttgaacaactctgg
aaaatccgcaaagcgatgccgaaacaaagcgatggactagatatttcagaacgatttgta
cgttatttgaagaaaacggagaataatgaagctttttatgagttactacaagaagagatg
tttaaaaaataa
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