Listeria monocytogenes N53-1 (serotype 1/2a): BN419_1678
Help
Entry
BN419_1678 CDS
T02513
Name
(GenBank) Ribonuclease J 2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lmob
Listeria monocytogenes N53-1 (serotype 1/2a)
Pathway
lmob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN419_1678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmob03019
]
BN419_1678
Messenger RNA biogenesis [BR:
lmob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN419_1678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
CCQ23996
LinkDB
All DBs
Position
complement(1361722..1363389)
Genome browser
AA seq
555 aa
AA seq
DB search
MTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYL
EENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFH
VVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLS
HIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQ
QVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETG
NLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMS
NNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGE
ILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTI
TSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFE
QTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgacaataaaaaaagcgaaaaacataaaaatcattccactcggcggtgtcgatgaaagt
ggcaaaaatttatatgtagtagaaatagacgaagatatctttatattagatgcgggctta
atgttccccgaaaatgaattactaggaattgatattgttattcctgatttcaaatattta
gaagaaaataaagatcgtgtaaaagctatttttctaacacacggtcacgaagatgccatt
ggtgcattgccatacttacttcaaaaaatcaaagcgcctgtttacgggacagaattaacg
attgctctagcaaaatcagcgcttaaagagcaccgcaaactacgcttcaagaatttccat
gtcgttaacgaagaaacaacattgtccttttcaaaaattgatgtttcctttttccggaca
acacatactattcctgattctgtgggtattgtccttgaaacaagcgaaggatccattgtt
tatacaggggatttcaaattcgatcaatcagcgaaagacggctacgcttctgatttaagc
catattgcagaatttggcgaaaagggtgtacttgccttgctttcggatagttcagaggct
gagcaccctggaacgacttctagtgatagtttaattgaagaagagatcagacatgctttc
agaatggcagatggtagaattattgttgcttgtgtagcttctaatttaattcgcttacaa
caagtactcgatgcatccgttgcaaccaaacgtaaagtcgctattgttggtaaagaacta
gagcgtgttttcgaaattgctggcagtttaggtaaaatcgtcattgaagaagacttaatt
gttccgttaaaagaacttaaaaaatatagcgatgatgaaattacaattattgaaacaggt
aatctaggagaaccaattcaatcattacaattaatgactaaaggaaaccatccgcaactt
aacatcaaacctggcgatactgtttacattacgactacgccatcaccatctcttgaaaca
atgatggcgaaaacaatggatatgctctataaagcaggtgcgaaagtgctaactatgagt
aacaatctcttcatctctggtcatgcaagccaagaagatttaaaattaatgattaactta
ttaaaaccaagatattttgttccagttcacggagaatatcgcatgttaatcagccatgct
aaattagctcatgaagttggcatggcaaaatcagaagtatttatcgttggtaaaggcgaa
attttagaatataaaaatgataaaatgacggccggaaatcgcgtttattctggtaatact
ttaattgatggattaggtgttggtgatgtaggaaacatcgtgctacgcgaccgtaaatta
ctctcagaagacggaattttcatcgttgtagtaacacttaatcgtaaatcaaaaaccatt
acttcaggaccagaaatcatttcacgcggctttatctacgtgcgcgaatcagaacatttg
attgaagaatcttccaaagttgtcacaaaaattgttgaaaaaaatcttcaagaaaccggc
tttgaatgggcgaaattaaaacaagacattcgcgaccaattaaatcgctacttatttgaa
caaacaaaacgacgtccaatgattttaccaattattatggaagtctag
DBGET
integrated database retrieval system
