Listeria monocytogenes SLCC5850 (serotype 1/2a): LMOSLCC5850_1301
Help
Entry
LMOSLCC5850_1301 CDS
T02223
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmoc
Listeria monocytogenes SLCC5850 (serotype 1/2a)
Pathway
lmoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOSLCC5850_1301 (dbpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmoc03019
]
LMOSLCC5850_1301 (dbpA)
03009 Ribosome biogenesis [BR:
lmoc03009
]
LMOSLCC5850_1301 (dbpA)
Enzymes [BR:
lmoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMOSLCC5850_1301 (dbpA)
Messenger RNA biogenesis [BR:
lmoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMOSLCC5850_1301 (dbpA)
Ribosome biogenesis [BR:
lmoc03009
]
Prokaryotic type
rRNA helicases
LMOSLCC5850_1301 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBY51770
LinkDB
All DBs
Position
1272906..1274318
Genome browser
AA seq
470 aa
AA seq
DB search
MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQ
VEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHI
VVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILSRLPKQRQNLFFSA
TMPEEMQDLIKRYQDNPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFC
NTKNQVDELTDLLDVKASKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVS
LVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPT
VIEVKANEEAFHKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTISKLEG
ITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttaaaattaagtgaagaaattaaaagagcgattaatgaactaggatataca
gaagcaacacctgttcaaaaagcggtaattccagttgccttaacaggagaagatattgtt
gctaaatcacaaactggtagtgggaaaacagcagcatttgctattcccattgcagaacag
gttgaatgggaagaaaataagccacaagcactaatcatcgttccaacacgagaacttgca
atgcaagtcaagacagaatgtacgaatatcggacgatttaaacgtgtcaaagctgcagca
atatatggacaatcaccatttgctaaacaaaaattagaactaagccaaaaaaatcatata
gtcgttgggacccctggtcgcctacttgaccatattgaaaaaggatcactgaatgtcgac
aaggttgcccatttagttttagatgaagtagatgaaatgttaagcatgggatttattgat
caagtggaagatatccttagccgcttaccaaaacagcgccaaaatctatttttctctgca
actatgccagaagaaatgcaagatttgatcaaacgttaccaagataatccaatggttatc
gaaatggcatcagaaaaaacaaatcctatcttccacgtggagatgcaaacagataataaa
gaaaaaacgttaaaagatgttttaattacggaaaacccggatagtgcgattattttttgc
aatacaaaaaatcaagtcgatgaactcactgatttacttgatgtaaaagctagtaaaatt
catggtggcttaagacaagaagatcgtttccgagcaatggatgatttcaaaagtggcaaa
tcgcgtttcttaattgcgacagatgtggcagggcgtggaatagatgtggataatgtatcg
ttagtcattaactacgatttaccaattgaaaaagaaaattatgtgcatcgtatcggtcgt
actggacgcgctggcaaaagtgggaaagctattagtttcgtgaaaacaaatgaaaatcca
cttttgcgtgatattgaagagatgctcgatgttacaattgaaaaaaaacgtaaaccgaca
gtgattgaagtgaaagcaaacgaagaagctttccacaaaaaacaacaaaagcgcccaaca
atcaaaaaagctcgtggggaaaaattaaataaaaacattatgaaactgtattttaacggg
ggcaaaaagaaaaaaatccgtgcggtagattttgtgggaactatttctaaattagaagga
attacggccgaagatattggaattattacgattgaagaccatgtttcttttgtcgaaatt
ttaaatggaaaaggtccggcagtgctggaaatgatgcgctctcgtaaagtgaaaggtaga
cgcctgaaagtaaacgaggccagaaaacgataa
DBGET
integrated database retrieval system
