Listeria monocytogenes SLCC5850 (serotype 1/2a): LMOSLCC5850_1509
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Entry
LMOSLCC5850_1509 CDS
T02223
Symbol
nfo
Name
(GenBank) apurinic endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lmoc
Listeria monocytogenes SLCC5850 (serotype 1/2a)
Pathway
lmoc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMOSLCC5850_1509 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmoc03400
]
LMOSLCC5850_1509 (nfo)
Enzymes [BR:
lmoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LMOSLCC5850_1509 (nfo)
DNA repair and recombination proteins [BR:
lmoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LMOSLCC5850_1509 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
CdhD
Motif
Other DBs
NCBI-ProteinID:
CBY51978
LinkDB
All DBs
Position
complement(1483203..1484096)
Genome browser
AA seq
297 aa
AA seq
DB search
MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIEAGLEHMKA
HDMADIVVHAPYIINIGNSVKPETFKLGVNFLQSEIERTRALGAKQIVLHPGAHVGEGAD
KGIKQIIQGLNEALIHDQDVQIALETMAGKGSECGRTFEELAQIIDGVTHNELLSVTFDT
CHTHDAGYDIVNDFDGVLNQFDKIVGIDRLKVLHINDSKNERGAHKDRHANIGFGHIGFD
ALHYIVHHPQLADVPKILETPYVGEDKASKKAPYKWEIAMLKNGEFDPDLLNKIQNS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctaagactaggttctcatgtatcaatgagcggaaagaaaatgcttcttggcgcaagt
gaagaagcagcttcttacggctcaaatacgtttatgatttatactggtgctccgcaaaat
acgcgcagaaagccaattgaagagttgaatattgaagctggcttagaacacatgaaagca
catgatatggctgacatcgttgttcacgcgccttatatcattaatattggaaactccgtt
aagccagaaacctttaaactaggtgttaatttcttgcaatctgaaattgaacgtacgcgc
gcgcttggtgccaagcaaatcgtacttcatcctggtgctcatgttggcgaaggggcagat
aaaggaatcaaacagattattcaaggtcttaatgaagcattaatacatgatcaagatgta
caaattgctttagaaacaatggctggaaaaggttctgaatgtggtcgtacttttgaggaa
ctcgcacaaattatcgatggcgtaacgcacaatgaattattatccgttacgtttgatact
tgtcatacgcatgatgcaggttacgatattgtgaatgactttgacggcgtattaaatcaa
ttcgataaaattgtcggcattgatcgcttgaaagtattacatatcaatgatagcaagaat
gaacgaggcgcacataaagaccgacatgcaaatatcggttttggtcatattggctttgat
gcccttcattatattgtgcatcatccgcaactagcagatgtgccgaaaatccttgaaacg
ccttatgttggtgaagataaagcatcaaaaaaagcaccatacaaatgggaaatcgccatg
ttaaaaaatggcgaatttgacccagatttattaaataaaattcaaaacagctaa
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