Listeria monocytogenes SLCC5850 (serotype 1/2a): LMOSLCC5850_1588
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Entry
LMOSLCC5850_1588 CDS
T02223
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmoc
Listeria monocytogenes SLCC5850 (serotype 1/2a)
Pathway
lmoc03410
Base excision repair
lmoc03430
Mismatch repair
lmoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMOSLCC5850_1588 (recJ)
03430 Mismatch repair
LMOSLCC5850_1588 (recJ)
03440 Homologous recombination
LMOSLCC5850_1588 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmoc03400
]
LMOSLCC5850_1588 (recJ)
DNA repair and recombination proteins [BR:
lmoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LMOSLCC5850_1588 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LMOSLCC5850_1588 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LMOSLCC5850_1588 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CBY52057
LinkDB
All DBs
Position
complement(1561089..1563524)
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AA seq
811 aa
AA seq
DB search
MLAFFYWKIPLGFSSDFRYNRKVERWGNVIHSKYLWNIEEAAEDKASQLAEQLKISLPLA
KLLWKRKITTQGQFDKFFHPEKYESYDPFLFAEMDLAVARIKQAIERNEQILVYGDYDAD
GVTSIAVLMKTLRHLGADADFYIPNRFTEGYGPNIAAFDMAKNQGTDLIITVDNGIAALE
VMAHAKEIGLDVIVTDHHEPREIMPEAVAVIHPKHPKSAYPFDELAGVGVAYKLSHALLG
EEPKELLDLVAVGTVADLVSLTDENRLLVQLGLRQLRESANLGLAVLAKKASLKLEEATE
ETIGFGLAPRLNAVGRLGPADPAADLLLTEDPEEALFLAEEIDDANKERKQIVVDTTKLA
MEAIEAKDTLGNVLVVYGEGWNTGILGIVASKLVGTYSRPAIVLGIDPVTGIAKGSGRSV
DAFHLYQALDKHRDLMMAFGGHPMAAGLTLPAENLTELEAKLQEEASYLSEEDFRPALKI
EEKIKLADVSVAFIAQLEKLAPFGMDNPKPIFLLENMHLKGTKRIGADKTHLKTMLATEE
NDATLDSIGFGVGDLVDKISPTAAVDVVGELSINEWNNVKKPQLRMMDIHISHWQLFDVR
NKSEWARILQEQTESRVFVCFEERTIGTLGEQNYILVNEKADFVADFQTEELVFADMPTN
IELVETIVRETKPERIFVHFDAAEGNQIPAIPDRLAFAELYSLIKKFQPFPIEKYTPRLM
QKFGWNKEQIDFMSKVFFDLEFAKMDSGQIIINEVVEKRNLDESLVYQQKVEEITTRKKL
LYSNYTELHSWMKSMMETSIYPNAEELENGN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgtttttttattggaagattcctcttggtttttctagtgattttcgatataat
aggaaggttgagaggtggggtaatgtgattcattcaaaatacttatggaatatcgaggaa
gcggcggaagataaagcaagtcaattagcagaacagctaaaaatctcgcttccacttgca
aaactactttggaaaagaaaaattacaacgcaaggacaattcgataaatttttccaccca
gaaaaatatgaaagctatgacccgtttttattcgcagagatggatcttgcggttgctaga
attaagcaagcgatagaacgaaatgagcagattttagtttatggagattatgatgcagat
ggggttactagtattgcagttttaatgaaaacattgcggcatttaggagccgatgctgat
ttttatattcctaatcgctttacggaaggttatggcccgaatattgccgcttttgatatg
gctaaaaaccaaggaacagatttaattattacggttgataatggtattgcggcgcttgaa
gtaatggctcatgccaaagagattggtttagatgttattgttacggatcaccatgaaccg
cgtgagattatgccagaagctgtggctgttatccacccaaagcatcctaaatcagcttat
ccgtttgatgaactagcgggtgtgggtgttgcttacaaattatcgcacgctttacttgga
gaagagccaaaagaactgctcgatttagttgcagttgggactgtggcagatttagtttct
ttaacagatgaaaatcgcttacttgttcaactgggattgcgtcaattacgcgaatccgcc
aaccttggactggctgtgctagctaaaaaagctagtttgaaattagaagaggctacggaa
gaaacgattggctttggtttggcaccacgactgaatgcagttggtcgattaggcccagca
gatccagcggctgatttacttttaacggaagatccagaagaggcacttttcttagcggaa
gaaatcgatgatgcgaataaggaacggaaacaaatagttgttgatacaacaaagctcgcg
atggaggcaattgaggcaaaagacactttaggaaatgtgctcgttgtttacggtgagggg
tggaataccggaatccttggaattgttgcttctaaattagttggaacatattctcgaccg
gcaattgtgttggggattgatcctgtaactggaattgctaaagggtctggtcgaagtgtg
gacgcgtttcatttatatcaagcgcttgataaacatcgtgatttaatgatggccttcggt
gggcatccaatggctgcaggccttacattgccagccgaaaacctaactgaattagaagct
aaattacaagaagaagcgagttatctttcagaagaagattttcgcccggccttgaaaata
gaagaaaaaattaagcttgctgatgtttcggtggcctttattgctcaacttgaaaaatta
gcgccttttgggatggataatcctaaaccgattttcttgttagaaaacatgcatttaaaa
ggaacgaaaagaattggggcagataaaacccatttaaaaacaatgctcgccacagaggaa
aatgatgccactttagactctattggatttggcgtaggagatttggtagataaaatttct
ccgacagcagccgtggatgtggttggagaattgtccatcaatgaatggaacaatgtgaaa
aaaccgcaactacgaatgatggatattcacatttcgcactggcaactctttgatgtacgt
aataaatcagagtgggctaggatactccaagaacaaacagaatcaagagttttcgtttgt
tttgaagaaagaacgattggtacgcttggagaacaaaactatattttggtgaatgaaaaa
gctgattttgtggcagatttccagacagaagaacttgttttcgcagatatgccaacgaat
atcgaattagttgaaacgattgttcgcgaaacgaaaccagagcgtatttttgtccatttt
gatgcagcagaaggtaatcaaatcccggcaataccagaccggttagcttttgcagaatta
tatagtctcattaaaaaattccaaccatttccaatcgaaaagtacacaccacggctaatg
caaaaatttggttggaataaagagcaaatagatttcatgtcaaaggtgttttttgattta
gaatttgctaaaatggatagtggtcagattattatcaatgaagttgttgaaaaacgtaat
ctggacgagtcacttgtttatcaacaaaaggtagaagaaataactacaagaaaaaaactg
ttgtactccaattatactgagcttcatagttggatgaaatcaatgatggaaacatcaatt
tacccgaatgcggaggaactagaaaatggaaattaa
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