Listeria monocytogenes SLCC5850 (serotype 1/2a): LMOSLCC5850_1996
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Entry
LMOSLCC5850_1996 CDS
T02223
Symbol
hup
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lmoc
Listeria monocytogenes SLCC5850 (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmoc03032
]
LMOSLCC5850_1996 (hup)
03036 Chromosome and associated proteins [BR:
lmoc03036
]
LMOSLCC5850_1996 (hup)
03400 DNA repair and recombination proteins [BR:
lmoc03400
]
LMOSLCC5850_1996 (hup)
DNA replication proteins [BR:
lmoc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LMOSLCC5850_1996 (hup)
Chromosome and associated proteins [BR:
lmoc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LMOSLCC5850_1996 (hup)
DNA repair and recombination proteins [BR:
lmoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LMOSLCC5850_1996 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CBY52465
LinkDB
All DBs
Position
complement(2007480..2007755)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKTDLVNSVAELADLSKKDAAKAVEAVFETIQTSLSKGEKVQLIGFGNFEVRERAARK
GRNPRTKEEIDIPASKVPAFKPGKALKEAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaaactgatttagtaaatagcgttgctgaactagctgatctttctaaaaaa
gacgcagcgaaagcagtagaagctgtattcgaaactattcaaacttctttatctaaaggt
gaaaaagttcaattaatcggatttggtaactttgaagtacgtgaacgtgctgcccgtaaa
ggccgtaaccctcgtactaaagaagaaatcgacatccctgcaagtaaagtaccagctttc
aaacctggtaaagcgcttaaagaagctgttaaataa
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