Listeria monocytogenes SLCC5850 (serotype 1/2a): LMOSLCC5850_2241
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Entry
LMOSLCC5850_2241 CDS
T02223
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
lmoc
Listeria monocytogenes SLCC5850 (serotype 1/2a)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS
MCM
AAA_2
HTH_30
AAA
PAS_9
AAA_16
AAA_7
HTH_50
Motif
Other DBs
NCBI-ProteinID:
CBY52710
LinkDB
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Position
complement(2256907..2258274)
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AA seq
455 aa
AA seq
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MFDLMDNLLGVQSFGELNKDMPTTLFVTDADGNILISNKFTALTVGMSLEELLRCNVRDL
VEDGVYNDSVTLEAIRTKQKKTKVINTKKGFSIRSTSTPILYPDGTVHLVVTMSDETQPD
SFKTWRGEAISGNKESLLLEDYKENDGTVIVAESVAMKQIVRVCNQIAPFDSKVLLYGES
GTGKEVLSRYIHEKSKQAAGPFISINCAAIPKALFESELFGHEKGSFTGADIEKPGMLEL
ADGGTLFLDEISEMPLELQAKMLRVLETGEVRRLGSTTETKRRFRLISATNRNLGEMVEK
GTFRRDLYYRINVVPVHIPALRERPQDIIGLARQFIQKFNQKYQKDFQLSGDKTKELLSH
NWPGNVRELRNKIERLVVMSGNKEVTVAETDDFALDLHFKEQTKKDSLYLKDYLQDVEKH
FILRVLEESNGNVTKAASTLGIHRSVLYRKLKTLH
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacttaatggataacttgctgggagtacagtcatttggcgaattaaataaggat
atgccgacaacgctttttgtcacggatgcagatgggaatattctaatttctaataaattc
actgcgcttacagttggaatgtcgctcgaagaattgcttcgttgtaatgtaagagactta
gtggaagacggtgtgtacaatgattctgtcacactagaagcaatccgcacaaaacaaaag
aaaacaaaagtgatcaatacgaagaaaggttttagtattcgttcgacttctacaccaatt
ctctatccagatggcacggtgcatttagttgttacgatgtcagatgaaacgcaaccagat
agttttaaaacatggcgtggtgaggcaatttctggcaataaagagtcacttcttcttgaa
gattataaagaaaatgatggaactgtgatagtagcagagagcgtcgcgatgaagcagata
gttcgagtgtgcaaccagatagctccgtttgacagtaaagtcttattatacggggagtct
ggtactggtaaagaagtcttgtcgcgctatattcatgaaaaaagtaaacaagctgctggg
ccttttatctcgattaactgtgccgcaatcccaaaagcactatttgaatctgagcttttc
ggacatgaaaaaggctcatttaccggtgcggatattgaaaaacccgggatgcttgagcta
gctgatggcggtacattgtttttagatgaaatttctgaaatgccgttagaacttcaagcg
aaaatgctccgagtgcttgaaactggcgaggtaagaagactgggctcaacaaccgagacg
aaacgccgctttagacttatttcagcgacaaatcgaaaccttggagaaatggttgaaaaa
ggaacatttaggcgtgatttatattatcgtattaatgttgtgccggttcacattccagca
ctaagagagcgaccgcaagatattattggtcttgcacgtcaattcatacaaaaatttaat
caaaagtaccaaaaagattttcagttaagtggcgataaaacgaaagaattactttctcat
aattggccaggaaatgtccgcgaacttagaaacaagattgagcgattagttgttatgtct
ggaaataaagaagtaacagttgcagaaacagatgatttcgcactagacttacattttaaa
gaacaaacaaaaaaagactcactttatttgaaagattatttgcaagatgtagaaaaacac
tttatactgcgagtgctcgaagaaagtaatggaaatgtgacaaaagctgctagtacactt
ggaattcatcgttctgttttatatcgaaaactaaaaacacttcattaa
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