| Entry |
|
|---|
| Symbol |
rpoC
|
|---|
| Name |
(GenBank) DNA-directed RNA polymerase beta' subunit
|
|---|
| KO |
|
|---|
| Organism |
lmod Listeria monocytogenes EGD (serotype 1/2a)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:lmod00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMON_0256 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:lmod03021]
LMON_0256 (rpoC)
03400 DNA repair and recombination proteins [BR:lmod03400]
LMON_0256 (rpoC)
Enzymes [BR:lmod01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMON_0256 (rpoC)
Transcription machinery [BR:lmod03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMON_0256 (rpoC)
DNA repair and recombination proteins [BR:lmod03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMON_0256 (rpoC)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
268650..272255
|
|---|
| AA seq |
1201 aa
MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPERDGLFCERIFGPMKDWEC
SCGKYKRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVMDM
SPRALEEIIYFASYVVTEPGDTPLEKKQLLSEREYRVYREKYGKGFSAGMGAEAIKKILA
DIDLEKETNDLKEELKSAQGQRRTRAIRRLEVMEAFRNSGNNPSWMVLDVLPVIPPEIRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVGRGLAHNIKSAKRKIERMAPEIWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREKAVGEGTIFKDINEAQLAYQNGYVHLHSRIAVF
AGSIPNERFTDEQRNQLLITTVGKLIFNTILPKSFPYINEPTKFNLEIETPAKYFVDTTT
DVRAHIAAQELIDPFKKKILGNIIAEVFKKFHITETSKMLDRMKDLGFKISTKAGMTVGI
ADILTLEEKHEILEKAHDTVEKITKSFRRGLITDDERYERVIAVWNAAKDEIQGKLILSL
DRLNPIFMMQDSGARGNISNFTQLAGMRGLMADPSGRIVELPITSNFREGLTVLEYFIST
HGARKGLTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLTIKAIREGTEIIEPLE
ERLEGRYSRKTIRHPETKEVIARENDLITEAIATQIVDAGIEEVTIRSAFTCNTKHGVCK
KCYGKNLATGTEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAIITEVGGEVVSIEEGRDRQQEITIQGTDDRRSYNIPYTARLRVEEGTIVER
GEALTEGSVDPKALIRVRDVLSVQEYLLAEVQKVYRMQGVEIGDKHVEVMVRQMLRKIRV
MDTGDTNILPGTLMDIHTFTEANRDAILSGSQPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVILGKLVPAGTGIGRYRKLKSEVIKETAEVTDEITN
I |
|---|
| NT seq |
3606 nt +upstreamnt +downstreamnt
ttgttagatgttaataattttgagtatatgaaaatcggtctggcatctccagataaaatt
cgttcatggtctcatggtgaagtaaaaaaacctgaaaccatcaactacagaacgcttaaa
cctgaacgtgacggcttattctgtgaaagaatttttggaccaatgaaagactgggaatgt
tcttgtggtaaatacaaacgtgttcgctataaaggtgtagtttgtgaccgttgtggagta
gaagtaacgaaatcaaaagtccgtcgtgaacgtatgggccatattgaactcgcagctcct
gtttctcacatctggtacttcaaaggaattccaagccgtatgggtcttgttatggatatg
tccccacgtgcattagaagaaattatctattttgcatcttacgtggttacagaaccaggc
gatactccacttgaaaagaaacaacttttatctgaacgtgaataccgcgtttaccgcgaa
aaatatggtaaaggtttctcagctggtatgggcgcagaagctatcaaaaaaatcttagcc
gatatcgacttagaaaaagaaacaaatgatttaaaagaagaactaaaatccgcacaaggt
caacgtcgtactcgtgcgattcgtcgtttggaagttatggaagctttccgtaattccggc
aacaacccaagctggatggtacttgacgtgctaccagttatcccaccagaaattcgtcca
atggtacaacttgaaggtggccgttttgcaacaagtgatttgaatgacttatatcgtcgg
gtaatcaaccggaacaaccgtttgaaacgcctacttgatctaggtgcaccaaacattatc
gtgcaaaatgaaaaacggatgctacaagaagctgtcgatgctttaattgacaacggtcgt
cgtggtcgtccagtaacaggtccaggtaaccgtccgcttaaatccctttctcatatgctt
aaagggaaacaaggtcgtttccgtcaaaacttactaggtaaacgtgtcgattattctggt
cgttccgttatcgtagttggacctaacttaaaaatgtaccaatgtggtcttccaaaagaa
atggcgcttgaattattcaaaccatttgttatgaaagaactagttggacgcggcttagca
cacaacattaagagcgctaaacgtaaaatcgaacgtatggctccagaaatctgggacgta
ttagaagaagttattcgtgaacatccggtattacttaaccgggcgcctacgcttcacaga
cttggtattcaagcatttgaaccaactctagttgaaggtcgcgcaatccgtcttcaccct
cttgtatgtacagcttacaacgctgactttgatggtgaccaaatggcggttcacgttcct
ttatccgcagaagcacaagcagaagcacgtattttaatgcttgcagctcaaaacattttg
aaccctaaagatggtaaaccagttgtaacaccttcccaagatatggtgctaggtaactac
taccttactttagaacgtgaaaaagctgtcggcgaaggtactatcttcaaagatatcaat
gaagcacaacttgcgtatcaaaacggctatgtacacttacactctcgtattgctgtattt
gctggttcgattccaaatgaacgtttcactgatgaacaacgcaaccaattattaattacg
actgttggtaaactgattttcaacacaatcttaccaaaatcgttcccttatattaatgaa
ccaacgaaatttaacttagaaatcgaaacaccagctaaatatttcgttgatacaacaact
gatgttcgtgctcatattgctgcacaagaactaattgatccattcaagaagaaaatcctc
ggtaacattatcgcggaagtcttcaagaaattccatattaccgaaacttcaaaaatgctt
gaccgtatgaaagatcttggtttcaaaatctcgactaaggccggcatgacagtaggtatt
gcggatatcttaacacttgaagaaaaacatgaaattcttgaaaaagcacatgatacagtt
gaaaaaatcactaaatcattccgtcgtggtctgattacagatgatgaaagatacgaacgc
gttatcgctgtatggaatgctgccaaagatgaaatccaaggaaaactgatcttgagtttg
gatcgcttaaacccaatcttcatgatgcaagattccggagctcgtggtaacatttccaac
tttacacagcttgctggtatgcgtggactgatggctgacccatccggacgtatcgtagaa
ttgccgattacatctaacttccgtgaaggtttaacggtcttagagtacttcatttctacc
catggtgcgcgtaaaggtcttaccgatacagcccttaaaacagccgattccggttacctt
actcgtcgtcttgttgacgtggctcaagatgttatcattcgtgaagacgattgtggcaca
gaccgcggtcttacaattaaggctattcgtgaaggtactgaaatcatcgaaccacttgaa
gaacgtctggaaggtcgttattctcgtaaaacaattcgtcacccagaaacaaaagaagtt
attgcacgtgaaaatgacttaattacagaagcaattgccactcaaatcgttgacgcaggc
attgaagaagtaactatccgttctgcattcacatgtaatacaaaacacggcgtatgtaaa
aaatgttatggtaaaaacttggcaactggtacagaagtcgaagttggagaagcagttggt
atcatcgctgcccaatctatcggggaaccaggaactcagcttactatgcgtactttccat
acaggtggggttgccggagacgatatcacgcaaggtcttccacgtattcaagaaatcttt
gaagcgcgtaatccgaaagggcaagctatcatcactgaagttggcggtgaagttgtttct
atcgaagaaggtcgtgatcgtcaacaagaaatcactatccaaggtacagatgaccgccgt
tcttacaacattccttacactgctcgcctgcgtgtagaagaaggaactatcgtagaacgt
ggggaagctctaactgaaggttctgtggatcctaaagccttgattcgtgttcgtgacgta
ttatccgttcaagaatatctacttgcagaagtacaaaaagtttaccgtatgcaaggggta
gaaattggcgataaacacgttgaagtaatggttcgtcaaatgttacgtaaaatccgcgta
atggatactggtgatacaaacatcttaccaggtacattaatggatattcatacgtttaca
gaagccaaccgcgatgctatcttaagtggtagccaacccgcaacaggtcgtccagttctt
ctagggattacaaaagcttcccttgaaactgattccttcttgtctgccgcatcattccaa
gaaacaactcgtgtcttgacagatgctgcaatcaaaggaaaacgtgacgaacttctagga
cttaaagaaaatgttatcctaggtaaacttgttccagctggtacaggtattggtcgttac
cgcaaactgaaatccgaagttatcaaggaaacagctgaagtaactgacgaaatcacaaat
atttaa |
|---|
