Listeria monocytogenes EGD (serotype 1/2a): LMON_1336
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Entry
LMON_1336 CDS
T02872
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lmod
Listeria monocytogenes EGD (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmod03032
]
LMON_1336 (topA)
03400 DNA repair and recombination proteins [BR:
lmod03400
]
LMON_1336 (topA)
Enzymes [BR:
lmod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LMON_1336 (topA)
DNA replication proteins [BR:
lmod03032
]
Prokaryotic type
DNA Topoisomerases
LMON_1336 (topA)
DNA repair and recombination proteins [BR:
lmod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LMON_1336 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
JHBP
DUF2996
Lar_restr_allev
Toprim_2
Toprim_3
HypA
Motif
Other DBs
NCBI-ProteinID:
CDG45194
UniProt:
A0A3Q0NE16
LinkDB
All DBs
Position
1300372..1302450
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTENDYEPRYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLELDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGLNGKKKKLSTADDVKEVMSAIKGKSFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEASNYIKETYGPEFSRNHKRSDKNAKGAQDAHEAIRPTSAMRSPQEVK
EYLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFIPTELGEIVNEMIEDYFPEILDVKFTANMESELDEVEHGE
VEWVKVIDEFYKRFEPNVIKADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERAC
PKCEKRALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacgattgagaagtat
ttaggcaagaaatttaaagttaaagcttccatgggacatgttcgtgacttaccgaagagt
caaatgggtgtagacacagaaaatgactatgaacctcgttatattacgattcgcggaaaa
ggccctgttttaaaagaattaaaacaagctgccaaaaaagcgaaaaaagtctatctcgca
gccgatccagatcgtgaaggggaagcaattgcatggcacttagctaacagtttagagtta
gatcaatcagacaaattacgtgtagtatttaacgaaataacgaaagaagcagtaaaagaa
tctttcaaaacaccacgtaaaattgacatggatttagtcaatgcacagcaagcgcgtaga
attttagaccgtttagttggatataatatcagccctatcctatggaaaaaagtaaaaaaa
ggtttgagtgctggtcgtgttcaatctattgcacttcgaatcattattgatagagagaaa
gaaatcaataatttcaaacccgaagaatactggacaattgatggtaacttccttaaaggt
aagaaaaaattccaagccaatttttatggtctaaatggcaaaaagaaaaaactttctact
gcggatgatgtaaaagaagtaatgtctgcaatcaaagggaaatcatttgacgtaacagat
gtaactaaaaaagaacgacttagaaaccctgctgcaccatttaccacctcaagtttgcaa
caagaagcagcacggaaactaaattaccgtacaagaaaaacgatgatgcttgctcaacaa
ttatatgaagggatcacacttggcaaacaaggcacagttggtttaatcacttatatgcgt
accgactccactcgtattgcagattccgctatactagaagcaagtaactacattaaagaa
acttatggacctgaattttctcgtaatcataaacgatcagataaaaacgcaaaaggtgcc
caagatgcccatgaagcaatcaggcctacaagtgcaatgagaagtccccaagaagtaaaa
gaatatttaacacgggaccaacttcgcctatatcgtttgatttgggaaagatttattgcg
agccaaatgacgccagcagttctagatacaatgcgtgttgacttagataacaacggcgtg
aacttcagagcaaatggctctaaaattaaatttcacggcttcatgaaagtctatgtagaa
agtaacgatgataatacggaagaaaaagaaaatatcttaccagatttgaaaaaaggagat
aaggtgcagtccgaatcgctcgaacagcgtcaacatttcacgcagccacctccacgttac
acagaagctagattagtaaaaacgctcgaagaaattggtattggtcgaccatcgacttat
tcgccgacactcgacacaattcagcgcagaaattatgtttctttaacgaataaacgcttt
attccaactgaattaggtgaaatcgttaatgaaatgattgaagactatttcccagaaatt
ttagatgtgaaattcactgccaacatggaaagtgagctcgatgaagttgagcacggagaa
gttgaatgggtgaaagtcattgatgaattttataaacgatttgaaccaaatgtaataaaa
gcagatgcagaaatggaaaaaatcgagattaaagatgaaccagccggaattgactgtgat
ctttgtggagctccaatggtatacaaaatgggtaaatacggtaagttcctagcttgtagt
agatttcctgattgtcgtaatacgaaagcaatcgtgaaagaaatcggtgttacgtgtcct
aaatgtgagaaaggacatgtaatagaaagaaaaagtaagaaaaaacgtattttctacggt
tgtgatcgttatccagattgtgactatgtatcttgggataaaccagtcgaacgtgcttgt
ccgaaatgtgagaaacgagcactagtcgagaagaaattgaaaaaaggtgtacaagtacaa
tgtacaaattgtgattacaaagaatcaacccaacaataa
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