Listeria monocytogenes La111 (serotype 1/2a): BN418_0162
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Entry
BN418_0162 CDS
T02512
Name
(GenBank) ATP-dependent DNA helicase Ta0057
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lmoe
Listeria monocytogenes La111 (serotype 1/2a)
Pathway
lmoe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmoe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BN418_0162
09124 Replication and repair
03420 Nucleotide excision repair
BN418_0162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmoe03021
]
BN418_0162
03036 Chromosome and associated proteins [BR:
lmoe03036
]
BN418_0162
03400 DNA repair and recombination proteins [BR:
lmoe03400
]
BN418_0162
Enzymes [BR:
lmoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BN418_0162
Transcription machinery [BR:
lmoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BN418_0162
Chromosome and associated proteins [BR:
lmoe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BN418_0162
DNA repair and recombination proteins [BR:
lmoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BN418_0162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCQ19454
UniProt:
A0A476Y6N0
LinkDB
All DBs
Position
140610..142949
Genome browser
AA seq
779 aa
AA seq
DB search
MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRI
VDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLA
EVTLQLTYYQVVDKEVKQFQRVMSREELSVFVEDLLSQYAIWAKASAAWEMKRNKTIQEL
TFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFY
FTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLN
EALFDMLQSEEAITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRF
FAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINVMNKD
MIALNKKLKDLDGTIYVQKNELIDWNESVLKFTFVAKEWLPQNTQSEIQADVLELYFESL
RYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYY
TNLLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALVSGENGN
YLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVL
GGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVL
QAVGRVIRGESDRGVVLLIEERFSADRYQVLFPTHWNHAKTVKSTDDISREVAGFWQNS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtgcgtatttcagttaggcgtttagtagagtttgtgcggagaagcggtagt
atcgataaccggatgactagttcagaccgcgccttagaaggaacaaaaattcatcaatta
ctccaaaaagaagctggggaagaatatgctgcagaggtacggctaaacctagaccgaata
gtggacggaattgctttttcgcttgatggacgcgcagatggcatcataaatggccgaatg
attgatgaaattaaaacaactgagacgccaatggatgaaattaccgaaaattttcgacct
cttcactgggcgcaacttatttgttatggatttatgcttgcagaaaagtccgatttggca
gaagttactctacaattaacgtattatcaagtagttgacaaagaagtaaaacaatttcaa
cgtgtaatgagtcgcgaggaactgagcgtttttgtggaagatctactttcccaatacgct
atttgggcaaaggcatctgccgcttgggaaatgaaacgaaataaaacaattcaagaatta
acgtttccatatgacagctatcgaagtgggcaaagagagcttgcgattgcggtgtaccga
acaatatcttcagaagaaagtttgttttgtgaagcgcccacaggtatcggcaaaacaatg
tcgactttgtttcccggtattaaagctatgggtgaagggaaaacggataaattgttttac
tttactgcaaaaactattacgcggcaagttgccgaagatgcgctagatgagatgcgtcgt
aaaggacttgctgcaaggagtgttacaataactgcgaaggataagatatgctttttagac
gagaggaaatgtgaaccagatcattgccaatttgcgcgaggttattatgatcgtttgaac
gaagcattgtttgatatgttgcaatccgaagaagcaattacccgtcaagttgttgagagt
tatgcccggaaatacacactttgtccatttgaattatcgctggatgtggctcttttttgt
gatgtaatagtttgtgactataattatttattcgacccggtagtctacttgaaacgtttc
tttgcagaagggccaggtaaatatacttttctggtggatgaagtgcataatttagtagac
cgtgcgcgctcgatgtactcagcgacattaaaaaaatctgcagttatgcaagtcaaacgg
ggactggacgcaaaaaataacaagcgattgctaaatgcaatcaatgtgatgaataaagac
atgatcgcactcaataaaaaactaaaggatttagatggaactatatatgtgcaaaaaaat
gaactcattgattggaatgaatcggtcctaaaattcacctttgtagcgaaggaatggttg
ccgcaaaatactcagtcagaaatacaagcggatgtgttggaactttattttgaaagtttg
agatatgttgcaattgcggatttttatgatgatcgttacgtcacacaagtaacgaaaagc
cacggagatttagaaataaaacaagtatgcttggatccgtcgttcttattatcagaaaga
ctgaaactcggaagcagctcggtgctcttttcagcaacgcttcgaccaatagattactat
acaaatttacttggtggtcaagaagacacgagtagaatgattttttcttcaccatttaaa
caaaaaaacatgcatttactagtagcggattatattagtacgaaataccaaatgcgtgaa
aatagtatggaagctgtcgtagatgctctctatgctctagtctctggggaaaacggcaac
tatttatttttctttccatcatttctatatttacaaaaggtatacgatttatttaaagaa
aaatatcctaacatcaggttgcaaaaacaagaaactgctatggatgaagagcgacgggag
cattttttagaaagatttcaagcagagaatgtagaaaccttgattggcttttgcgtctta
ggaggcgttttttcagaaggggtagatcttcgtggcaaccgattagtcggtgcggcagtt
gttggagtaggacttgcgcaactgaatcacgaatctgatttaattaaagattattataat
gaaacgattggtcggggatttgattatgcatatcagataccaggaatgaataaggtgctt
caagcagttggccgggttattcgaggagaatcggaccgtggcgtagtgttgttaatagaa
gaacgattttctgccgatcgttaccaagtattattccctacgcactggaaccatgcgaaa
acagtgaagagcacagatgatatctcccgagaagtggccggattttggcagaatagctaa
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