Listeria monocytogenes La111 (serotype 1/2a): BN418_0291
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Entry
BN418_0291 CDS
T02512
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lmoe
Listeria monocytogenes La111 (serotype 1/2a)
Pathway
lmoe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmoe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN418_0291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmoe03021
]
BN418_0291
03400 DNA repair and recombination proteins [BR:
lmoe03400
]
BN418_0291
Enzymes [BR:
lmoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN418_0291
Transcription machinery [BR:
lmoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN418_0291
DNA repair and recombination proteins [BR:
lmoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN418_0291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-ProteinID:
CCQ19564
LinkDB
All DBs
Position
262269..264089
Genome browser
AA seq
606 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPERDGLFCERIFGPMKDWEC
SCGKYKRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVMDM
SPRALEEIIYFASYVVTEPGDTPLEKKQLLSEREYRVYREKYGKGFSAGMGAEAIKKILA
DIDLEKETNDLKEELKSAQGQRRTRAIRRLEVMEAFRNSGNNPSWMVLDVLPVIPPEIRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVGRGLAHNIKSAKRKIERMAPEIWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREKAVGEGTIFKDINEAQLAYQNGYVHLHSRIAVF
AGSIPNERFTDEQRNQLLITTVGKLIFNTILPKSFPYINEPTKFNLEIETPAKYFVDTTT
DVRHKN
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgttaataattttgagtatatgaaaatcggtctggcatctccagataaaatt
cgttcatggtctcatggtgaagtaaaaaaacctgaaaccatcaactacagaacgcttaaa
cctgaacgtgacggcttattctgtgaaagaatttttggaccaatgaaagactgggaatgt
tcttgtggtaaatacaaacgtgttcgctataaaggcgtagtttgtgaccgttgtggagta
gaagtaacgaaatcaaaagtccgtcgtgaacgtatgggccatattgaactcgcagctcct
gtttctcacatctggtacttcaaaggaattccaagccgtatgggtcttgttatggatatg
tccccacgtgcattagaagaaattatctactttgcatcttacgtggttacagaaccaggc
gatactccacttgaaaagaaacaacttttatctgaacgtgaataccgcgtttaccgcgaa
aaatatggtaaaggtttctcagctggtatgggcgcagaagctatcaaaaaaatcttagcc
gatatcgacttagaaaaagaaacaaatgatttaaaagaagaactaaaatccgcacaaggt
caacgtcgtactcgtgcgattcgtcgtttggaagttatggaagctttccgtaattccggc
aacaacccaagctggatggtacttgacgtgctaccagttatcccaccagaaattcgtcca
atggtacaacttgaaggtggccgttttgcaacaagtgatttgaatgacttatatcgtcgg
gtaatcaaccggaacaaccgtttgaaacgccttcttgatctaggtgcaccaaacattatc
gtgcaaaatgaaaaacggatgctacaagaagctgtcgatgctttaattgacaacggtcgt
cgtggtcgtccagtaacaggtccaggtaaccgtccgcttaaatccctttctcatatgctt
aaagggaaacaaggtcgtttccgtcaaaacttactaggtaaacgtgtcgattattctggt
cgttccgttatcgtagttggacctaacttaaaaatgtaccaatgtggtcttccaaaagaa
atggcgcttgaattattcaaaccatttgttatgaaagaactagttggacgcggcttagca
cacaacattaagagcgctaaacgtaaaatcgaacgtatggctccagaaatctgggacgta
ttagaagaagttattcgtgaacatccggtattacttaaccgggcgcctacgcttcacaga
cttggtattcaagcatttgaaccaacgctagttgaaggtcgcgcaatccgtcttcaccct
cttgtatgtacagcttacaacgctgactttgatggtgaccaaatggcggttcacgttcct
ttatccgcagaagcacaagcagaagcacgtattttaatgcttgcagcgcaaaacattttg
aaccctaaagatggtaaaccagttgtaacaccttcccaagatatggtgctaggtaactac
tatcttactttagaacgtgaaaaagctgtcggcgaaggtactatcttcaaagatatcaat
gaagcacaacttgcgtatcaaaatggctatgtacacttacactctcgtattgctgtattt
gctggttcgattccaaatgaacgtttcactgatgaacaacgcaaccaattattaattacg
actgttggtaaattgattttcaacacaatcttaccaaaatcgttcccttatattaatgaa
ccaacgaaattcaacttagaaatcgaaacaccagctaaatatttcgttgatacaacaaca
gacgttcggcacaagaactaa
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