Listeria monocytogenes La111 (serotype 1/2a): BN418_1683
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Entry
BN418_1683 CDS
T02512
Name
(GenBank) Ribonuclease J 2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lmoe
Listeria monocytogenes La111 (serotype 1/2a)
Pathway
lmoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN418_1683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmoe03019
]
BN418_1683
Messenger RNA biogenesis [BR:
lmoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN418_1683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
CCQ20869
UniProt:
A0A1D2IQH9
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All DBs
Position
complement(1361899..1363566)
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AA seq
555 aa
AA seq
DB search
MTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYL
EENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFH
VVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLS
HIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQ
QVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETG
NLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMS
NNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGE
ILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTI
TSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFE
QTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgacaataaaaaaagcgaaaaacataaaaatcattccactcggcggtgtcgatgaaagt
ggcaaaaatttatatgtagtagaaatagacgaagatatctttatattagatgcgggctta
atgttccccgaaaatgaattactaggaattgatattgttattcctgatttcaaatattta
gaagaaaataaagatcgtgtaaaagctatttttctaacacacggtcacgaagatgccatt
ggtgcattgccatacttacttcaaaaaatcaaagcgcctgtttacgggacagaattaacg
attgctctagcaaaatcagcgcttaaagagcaccgcaaactacgcttcaagaatttccat
gtcgttaacgaagaaacaacattgtccttttcaaaaattgatgtttcctttttccggaca
acacatactattcctgattctgtgggtattgtccttgaaacaagcgaaggatccattgtt
tatacaggggatttcaaattcgatcaatcagcgaaagacggctacgcttctgatttaagc
catattgcagaatttggcgaaaagggtgtacttgccttgctttcggatagttcagaggct
gagcaccctggaacgacttctagtgatagtttaattgaagaagagatcagacatgctttc
agaatggcagatggtagaattattgttgcttgtgtagcttctaatttaattcgcttacaa
caagtactcgatgcatccgttgcaaccaaacgtaaagtcgctattgttggtaaagaacta
gagcgtgttttcgaaattgctggcagtttaggtaaaatcgtcattgaagaagacttaatt
gttccgttaaaagaacttaaaaaatatagcgatgatgaaattacaattattgaaacaggt
aatctaggagaaccaattcaatcattacaattaatgactaaaggaaaccatccgcaactt
aacatcaaacctggcgatactgtttacattacgactacgccatcaccatctcttgaaaca
atgatggcgaaaacaatggatatgctctataaagcaggtgcgaaagtgctaactatgagt
aacaatctcttcatctctggtcatgcaagccaagaagatttaaaattaatgattaactta
ttaaaaccaagatattttgttccagttcacggagaatatcgcatgttaatcagccatgct
aaattagctcatgaagttggcatggcaaaatcagaagtatttatcgttggtaaaggcgaa
attttagaatataaaaatgataaaatgacggccggaaatcgcgtttattctggtaatact
ttaattgatggattaggtgttggtgatgtaggaaacatcgtgctacgcgaccgtaaatta
ctctcagaagacggaattttcatcgttgtagtaacacttaatcgtaaatcaaaaaccatt
acttcaggaccagaaatcatttcacgcggctttatctacgtgcgcgaatcagaacatttg
attgaagaatcttccaaagttgtcacaaaaattgttgaaaaaaatcttcaagaaaccggc
tttgaatgggcgaaattaaaacaagacattcgcgaccaattaaatcgctacttatttgaa
caaacaaaacgacgtccaatgattttaccaattattatggaagtctag
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