Listeria monocytogenes La111 (serotype 1/2a): BN418_1707
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Entry
BN418_1707 CDS
T02512
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lmoe
Listeria monocytogenes La111 (serotype 1/2a)
Pathway
lmoe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lmoe00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN418_1707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmoe03021
]
BN418_1707
Transcription machinery [BR:
lmoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN418_1707
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
CCQ20893
UniProt:
A0A1D2IVM2
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All DBs
Position
complement(1382537..1383661)
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AA seq
374 aa
AA seq
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MSDKTKNTKPVAELSVEQVKEALIEEGKKKGILTYAKIAARLAPFTLDSDQMDEYLEHVG
EAGIEVSDDADDEDPDETELVKEETESFDLTDMSVPPGVKINDPVRMYLKEIGRVDLLTA
DEEIALAKRIEAGDIEAKGRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEK
FDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRSLLQDLGRDP
SPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSDHAAYE
LLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKL
RHPSRSKQLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaacaaaaaacacaaaaccagttgctgaactaagtgttgagcaagtaaaa
gaagccctgatagaagaaggtaagaaaaaggggattttaacttatgcaaaaatcgctgcc
agattagctccattcactttggattccgatcaaatggatgagtatttagaacatgttggt
gaagcaggaattgaagtttctgacgatgcagatgacgaggatccagatgaaacagaactt
gtaaaagaagaaaccgaatcctttgatttaacagatatgagtgtaccaccaggcgtaaaa
attaatgaccctgttcgcatgtatctaaaagaaattggtcgagtagacttacttacagcg
gatgaagaaattgccttagcaaaacgtatcgaagctggcgacattgaagccaaaggacgt
cttgcagaagctaacctacgccttgttgtaagtattgcaaaacgttatgttggtcgtggt
atgttattccttgatttaattcaagaaggtaacatggggctaatgaaagccgttgaaaaa
tttgactttaataaagggtttaaattcagtacctatgcaacgtggtggattcgtcaagcg
ataacccgtgcgattgcggaccaagctagaacaatccgtattccggtgcatatggttgaa
acaatcaacaaactaatccgtgtacaacgctccttattacaagatttaggccgcgatcct
tcaccagaagaaattggtgaagaaatggacttaccaactgaaaaagttcgggaaatcctt
aaaatcgcacaagagccagtttcccttgaaacaccaattggtgaagaagacgattcacat
ctaggcgattttatcgaagaccaagatgcaacttcaccgtccgatcacgcagcatacgaa
ttactaaaagaacaactagaagatgtgcttgatacattaactgaccgtgaagaaaatgta
cttcgcttacgttttggtctagatgatggtcgtacgcgcactttagaagaagttggtcgt
gtatttggtgtaactcgtgaacggattcgtcaaattgaagccaaagctttacgtaaatta
cgtcatccaagccgcagcaaacaattgaaagacttcctggaataa
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